RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 MAPK6Q16659 721 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
RER1-209ENST00000605895 PPP1R21Q6ZMI0 780 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 RINLQ6ZS11 566 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 ANKRD35Q8N283 1001 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 GLIS1Q8NBF1 620 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 DNAJC1Q96KC8 554 aaKnown RBP16.42■□□□□ 0.22
RER1-209ENST00000605895 RBM15Q96T37 977 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■■□□□ 13.6
RER1-209ENST00000605895 USTQ9Y2C2 406 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
RER1-209ENST00000605895 LRCH1Q9Y2L9 728 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 A6NJR5 290 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 FAM13AO94988 1023 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 PLS3P13797 630 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 PTPN4P29074 926 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 UBXN2AP68543 259 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 MOGSQ13724 837 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 SEPT7Q16181 437 aaKnown RBP16.42■□□□□ 0.22
RER1-209ENST00000605895 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 CLNKQ7Z7G1 428 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 PPM1KQ8N3J5 372 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 FBXO27Q8NI29 283 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 SHKBP1Q8TBC3 707 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 SNF8Q96H20 258 aa16.42■□□□□ 0.22
RER1-209ENST00000605895 ASMTLO95671 621 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 ALAS1P13196 640 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 SERPINB3P29508 390 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 HOXA13P31271 388 aaPredicted RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 SKIV2L2P42285 1042 aaKnown RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 RPS8P62241 208 aaKnown RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 EFTUD2Q15029 972 aaKnown RBP eCLIP16.41■□□□□ 0.227e-7■■■■□ 21.1
RER1-209ENST00000605895 SYCP2LQ5T4T6 812 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 PPFIBP2Q8ND30 876 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 C10orf82Q8WW14 230 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 METTL14Q9HCE5 456 aaKnown RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 DCTN3O75935 186 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 AKR1B1P15121 316 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 PSMC4P43686 418 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 SPARCL1Q14515 664 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 CNPY1Q3B7I2 92 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 HIPK4Q8NE63 616 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 NMD3Q96D46 503 aaKnown RBP16.41■□□□□ 0.22
RER1-209ENST00000605895 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
RER1-209ENST00000605895 GOLGA8IPA6NC78 632 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 GOLGA8JA6NMD2 632 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 SPATA31C1P0DKV0 1188 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 SGSM1Q2NKQ1 1148 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 IZUMO2Q6UXV1 221 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 ENDOVQ8N8Q3 282 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 C10orf88Q9H8K7 445 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 ETNK2Q9NVF9 386 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 EMSYQ7Z589 1322 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 SIGLEC16A6NMB1 481 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 MAP3K7O43318 606 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 EDF1O60869 148 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 OPHN1O60890 802 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 PSMG1O95456 288 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 KRT4P19013 534 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 RTP1P59025 263 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 NOP9Q86U38 636 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 SMC6Q96SB8 1091 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 CCDC77Q9BR77 488 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 PI4K2BG5E9Z4 385 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 BAG3O95817 575 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 BMP3P12645 472 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 IVDP26440 423 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 P3H1Q32P28 736 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 WASHC2DQ5SRD0 308 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 P2RX7Q99572 595 aaKnown RBP16.4■□□□□ 0.22
RER1-209ENST00000605895 KRT82Q9NSB4 513 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.4■□□□□ 0.229e-8■■■□□ 14.6
RER1-209ENST00000605895 FRMD4BQ9Y2L6 1034 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
RER1-209ENST00000605895 EML1O00423 815 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 GSC2O15499 205 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 OR6B1O95007 311 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 MAGEA4P43358 317 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 SLC34A1Q06495 639 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 NEDD1Q8NHV4 660 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 MAK16Q9BXY0 300 aaKnown RBP16.39■□□□□ 0.21
RER1-209ENST00000605895 ANAPC7Q9UJX3 599 aa16.39■□□□□ 0.21
RER1-209ENST00000605895 RPS6KL1Q9Y6S9 549 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms