RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ABCD1P33897 745 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 DDIT3P35638 169 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 CACNB1Q02641 598 aaPredicted RBP19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 MTMR3Q13615 1198 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 MCM6Q14566 821 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 KREMEN2Q8NCW0 462 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 PBXIP1Q96AQ6 731 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 ZNF707Q96C28 371 aaPredicted RBP19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 ASIC4Q96FT7 647 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 ZMAT2Q96NC0 199 aaKnown RBP19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 PARVGQ9HBI0 331 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 CLDN3O15551 220 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 RFPL2O75678 378 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 ZMYND10O75800 440 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 FAM13AO94988 1023 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 PIGRP01833 764 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 SPATA31D3P0C874 917 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 RPL9P32969 192 aaKnown RBP19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 SOX4Q06945 474 aaPredicted RBP19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 SPATA31D4Q6ZUB0 917 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 GLYCTKQ8IVS8 523 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 RASSF8Q8NHQ8 419 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 STAMQ92783 540 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 ZSCAN16Q9H4T2 348 aaPredicted RBP19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 PLEKHA5Q9HAU0 1116 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 GOLGA2P5Q9HBQ8 144 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 MTRRQ9UBK8 725 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 LIMD1Q9UGP4 676 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 FBXO2Q9UK22 296 aaPredicted RBP19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 FBXW11Q9UKB1 542 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 MTMR6Q9Y217 621 aa19.6■□□□□ 0.73
CHMP2A-203ENST00000597209 VWA8A3KMH1 1905 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 CLUHO75153 1309 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 MEFVO15553 781 aaPredicted RBP19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 RAB33AQ14088 237 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 DHX8Q14562 1220 aaKnown RBP19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 KYAT1Q16773 422 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 SLC10A6Q3KNW5 377 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 RTL10Q7L3V2 364 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 MYCT1Q8N699 235 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 C3orf58Q8NDZ4 430 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 SMG7Q92540 1137 aaKnown RBP19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 SNX21Q969T3 373 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 EPSTI1Q96J88 318 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 ANKFY1Q9P2R3 1169 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 STK17AQ9UEE5 414 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 CCDC39Q9UFE4 941 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 TBX20Q9UMR3 447 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 CITO14578 2027 aa19.59■□□□□ 0.73
CHMP2A-203ENST00000597209 PODXLO00592 558 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 TRAK2O60296 914 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 KRT18P05783 430 aaKnown RBP19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 CLTAP09496 248 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 HNRNPA1P09651 372 aaKnown RBP eCLIP19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 HARSP12081 509 aaKnown RBP19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 IGFBP6P24592 240 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 MARCKSP29966 332 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 HOXA9P31269 272 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 ANKS3Q6ZW76 656 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 USP49Q70CQ1 688 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 FBXL6Q8N531 539 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 TSPAN18Q96SJ8 248 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 FIZ1Q96SL8 496 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 HAPLN2Q9GZV7 340 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 ST6GALNAC4Q9H4F1 302 aa19.58■□□□□ 0.72
CHMP2A-203ENST00000597209 STX6O43752 255 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 TBCAO75347 108 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 POU2F2P09086 479 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 BRCC3P46736 316 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 LIG4P49917 911 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 GTF2BQ00403 316 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 SLC39A14Q15043 492 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 UVSSAQ2YD98 709 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 FAM173BQ6P4H8 233 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 BICD1Q96G01 975 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 PIDD1Q9HB75 910 aa19.57■□□□□ 0.72
CHMP2A-203ENST00000597209 MYO10Q9HD67 2058 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 PDCD11Q14690 1871 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 TTC26A0AVF1 554 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 K7ENM7 598 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 SYN3O14994 580 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 ADAM12O43184 909 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 ASGR2P07307 311 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 ADRB2P07550 413 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 MYBP10242 640 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 TKTP29401 623 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 TXLNAP40222 546 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 MATR3P43243 847 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 SPECC1Q5M775 1068 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 LIN9Q5TKA1 542 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 SUGP1Q8IWZ8 645 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 KRI1Q8N9T8 703 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 USP28Q96RU2 1077 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 IGSF9Q9P2J2 1179 aa19.56■□□□□ 0.72
CHMP2A-203ENST00000597209 EPS15L1Q9UBC2 864 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms