RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NECTIN4Q96NY8 510 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 RHOBTB2Q9BYZ6 727 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 PANK2Q9BZ23 570 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 EPHX3Q9H6B9 360 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 KBTBD4Q9NVX7 518 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 ANKFY1Q9P2R3 1169 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 STYXL1Q9Y6J8 313 aa14.26□□□□□ -0.13
USE1-207ENST00000596136 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 OGTO15294 1046 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 FGFR3P22607 806 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 IGFBP6P24592 240 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 RPL9P32969 192 aaKnown RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 MTHFRP42898 656 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 LIG4P49917 911 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 ZC2HC1CQ53FD0 456 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 FAM171A1Q5VUB5 890 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 CES5AQ6NT32 575 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 SFR1Q86XK3 245 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 CMASQ8NFW8 434 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 RIN2Q8WYP3 895 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 HVCN1Q96D96 273 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 BICD1Q96G01 975 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 B3GALT6Q96L58 329 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 C1QTNF1Q9BXJ1 281 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 SFXN1Q9H9B4 322 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 OLFML3Q9NRN5 406 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 CFAP45Q9UL16 551 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.25□□□□□ -0.13
USE1-207ENST00000596136 PLXNA3P51805 1871 aa14.25□□□□□ -0.13
USE1-207ENST00000596136 B3GAT3O94766 335 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 HARSP12081 509 aaKnown RBP14.24□□□□□ -0.13
USE1-207ENST00000596136 ALADP13716 330 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 POU5F1Q01860 360 aaKnown RBP14.24□□□□□ -0.13
USE1-207ENST00000596136 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 SEZ6Q53EL9 994 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 RARS2Q5T160 578 aaKnown RBP14.24□□□□□ -0.13
USE1-207ENST00000596136 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 PDXDC1Q6P996 788 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 CYP26C1Q6V0L0 522 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 C15orf39Q6ZRI6 1047 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 PDILTQ8N807 584 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 C12orf76Q8N812 135 aaPredicted RBP14.24□□□□□ -0.13
USE1-207ENST00000596136 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 C3orf58Q8NDZ4 430 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 HASPINQ8TF76 798 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 RIPOR3Q96MK2 946 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 CLSTN3Q9BQT9 956 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 APOL5Q9BWW9 433 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 PLEKHA4Q9H4M7 779 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 DPP7Q9UHL4 492 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 ZDHHC9Q9Y397 364 aa14.24□□□□□ -0.13
USE1-207ENST00000596136 ANKRD63C9JTQ0 380 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 PODXLO00592 558 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 TGM5O43548 720 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 DCXO43602 365 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 GPR37L1O60883 481 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 GLUD1P00367 558 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 CXCL8P10145 99 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 CYP3A5P20815 502 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 TNFSF9P41273 254 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 DNM1Q05193 864 aaKnown RBP14.23□□□□□ -0.13
USE1-207ENST00000596136 ENOX2Q16206 610 aaKnown RBP14.23□□□□□ -0.13
USE1-207ENST00000596136 HERC4Q5GLZ8 1057 aaPredicted RBP14.23□□□□□ -0.13
USE1-207ENST00000596136 ATAT1Q5SQI0 421 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 KANK3Q6NY19 840 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 RNF135Q8IUD6 432 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
USE1-207ENST00000596136 LRRC27Q9C0I9 530 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 POMKQ9H5K3 350 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 C11orf16Q9NQ32 467 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 MAN1C1Q9NR34 630 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 CDH22Q9UJ99 828 aa14.23□□□□□ -0.13
USE1-207ENST00000596136 CPSF3Q9UKF6 684 aaKnown RBP14.23□□□□□ -0.13
USE1-207ENST00000596136 LACTBL1A8MY62 500 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 LRPAP1P30533 357 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 MATR3P43243 847 aaKnown RBP eCLIP14.22□□□□□ -0.13
USE1-207ENST00000596136 ALCAMQ13740 583 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 PSMD5Q16401 504 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
USE1-207ENST00000596136 RESP18Q5W5W9 173 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 ELMSAN1Q6PJG2 1045 aa14.22□□□□□ -0.13
USE1-207ENST00000596136 PRSS55Q6UWB4 352 aaPredicted RBP14.22□□□□□ -0.13
USE1-207ENST00000596136 TMC5Q6UXY8 1006 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms