RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 DMP1Q13316 513 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-203ENST00000593641 PDIA5Q14554 519 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 NBR1Q14596 966 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 UPP1Q16831 310 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 ZNF568Q3ZCX4 644 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 PARM1Q6UWI2 310 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 ANKS3Q6ZW76 656 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 SHDQ96IW2 340 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 SH2B1Q9NRF2 756 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-203ENST00000593641 CDY1Q9Y6F8 540 aa24.88■■□□□ 1.57
SSBP4-203ENST00000593641 DCNP07585 359 aaKnown RBP24.87■■□□□ 1.57
SSBP4-203ENST00000593641 PEX3P56589 373 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 ERICH6BQ5W0A0 696 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 RTL10Q7L3V2 364 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 C4orf32Q8N8J7 132 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 MRPL4Q9BYD3 311 aaKnown RBP24.87■■□□□ 1.57
SSBP4-203ENST00000593641 GOLGA2P5Q9HBQ8 144 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 DNM3Q9UQ16 869 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 BACE2Q9Y5Z0 518 aa24.87■■□□□ 1.57
SSBP4-203ENST00000593641 TKTP29401 623 aaKnown RBP24.86■■□□□ 1.57
SSBP4-203ENST00000593641 GRM5P41594 1212 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 NPTX2P47972 431 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 GPC5P78333 572 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 PTGDRQ13258 359 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 PABPC1LQ4VXU2 614 aaKnown RBP24.86■■□□□ 1.57
SSBP4-203ENST00000593641 KRT79Q5XKE5 535 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 CEP120Q8N960 986 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 IGSF22Q8N9C0 903 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 DDX27Q96GQ7 796 aaKnown RBP24.86■■□□□ 1.57
SSBP4-203ENST00000593641 DRC1Q96MC2 740 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 RPP25Q9BUL9 199 aaKnown RBP24.86■■□□□ 1.57
SSBP4-203ENST00000593641 CDT1Q9H211 546 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 SLC38A7Q9NVC3 462 aa24.86■■□□□ 1.57
SSBP4-203ENST00000593641 FANCMQ8IYD8 2048 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 SMIM28A0A1B0GU29 152 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 OSTNP61366 133 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 PJA1Q8NG27 643 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 ITFG1Q8TB96 612 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 KCNG4Q8TDN1 519 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 ACO2Q99798 780 aaKnown RBP24.85■■□□□ 1.57
SSBP4-203ENST00000593641 SEMA4AQ9H3S1 761 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 TMEM134Q9H6X4 195 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 KMT5AQ9NQR1 393 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 KCNH3Q9ULD8 1083 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 WDR87Q6ZQQ6 2873 aa24.85■■□□□ 1.57
SSBP4-203ENST00000593641 I3L4J1 428 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 LAD1O00515 517 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 HIP1RO75146 1068 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 U2AF2P26368 475 aaKnown RBP eCLIP24.84■■□□□ 1.571e-7■□□□□ 8
SSBP4-203ENST00000593641 ZC3H14Q6PJT7 736 aaKnown RBP24.84■■□□□ 1.57
SSBP4-203ENST00000593641 C3orf58Q8NDZ4 430 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 FOXQ1Q9C009 403 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 HCFC1R1Q9NWW0 138 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 ARHGAP28Q9P2N2 729 aa24.84■■□□□ 1.57
SSBP4-203ENST00000593641 PDCD11Q14690 1871 aaKnown RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 E9PMD0 336 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 IGFBP6P24592 240 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 BRCC3P46736 316 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 STARD6P59095 220 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 PFKPQ01813 784 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 CD300LGQ6UXG3 332 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 RSPO2Q6UXX9 243 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 NPAS3Q8IXF0 933 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 TCHPQ9BT92 498 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 DLGAP2Q9P1A6 1054 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 DNMT3BQ9UBC3 853 aaKnown RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 MRPS23Q9Y3D9 190 aaKnown RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 RBM19Q9Y4C8 960 aaKnown RBP24.83■■□□□ 1.57
SSBP4-203ENST00000593641 PCDHB6Q9Y5E3 794 aa24.83■■□□□ 1.57
SSBP4-203ENST00000593641 PODXLO00592 558 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 LMNAP02545 664 aaKnown RBP24.82■■□□□ 1.56
SSBP4-203ENST00000593641 ELF1P32519 619 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 FOXK2Q01167 660 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 SOX4Q06945 474 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-203ENST00000593641 SNW1Q13573 536 aaKnown RBP24.82■■□□□ 1.56
SSBP4-203ENST00000593641 XKR4Q5GH76 650 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 C1orf210Q8IVY1 113 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 DAW1Q8N136 415 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 ACAP3Q96P50 834 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 TARS2Q9BW92 718 aaKnown RBP24.82■■□□□ 1.56
SSBP4-203ENST00000593641 C17orf75Q9HAS0 396 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 PTPRHQ9HD43 1115 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 R4GN57 208 aa24.82■■□□□ 1.56
SSBP4-203ENST00000593641 ZNF292O60281 2723 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 KANSL1LA0AUZ9 987 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 LRG1P02750 347 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 MCF2P10911 925 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 TOB1P50616 345 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-203ENST00000593641 ROR1Q01973 937 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 PRKCQQ04759 706 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 MLF2Q15773 248 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-203ENST00000593641 VARS2Q5ST30 1063 aaKnown RBP24.81■■□□□ 1.56
SSBP4-203ENST00000593641 SLC8B1Q6J4K2 584 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 RINT1Q6NUQ1 792 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 MPZL3Q6UWV2 235 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 ALKAL1Q6UXT8 129 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 DTHD1Q6ZMT9 781 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 ZNF461Q8TAF7 563 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 ING5Q8WYH8 240 aa24.81■■□□□ 1.56
SSBP4-203ENST00000593641 KXD1Q9BQD3 176 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms