RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 ZNF560Q96MR9 790 aa16.13■□□□□ 0.17
SYMPK-202ENST00000593504 SOX10P56693 466 aa16.13■□□□□ 0.17
SYMPK-202ENST00000593504 CDR2LQ86X02 465 aaPredicted RBP16.13■□□□□ 0.17
SYMPK-202ENST00000593504 ATL2Q8NHH9 583 aa16.13■□□□□ 0.17
SYMPK-202ENST00000593504 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.13■□□□□ 0.17
SYMPK-202ENST00000593504 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
SYMPK-202ENST00000593504 FRMPD4Q14CM0 1322 aa16.13■□□□□ 0.17
SYMPK-202ENST00000593504 CYP3A7-CYP3A51PA0A087WV96 503 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 CYP3A7P24462 503 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 PPM1FP49593 454 aaPredicted RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 LAMC2Q13753 1193 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 MCEEQ96PE7 176 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 NIF3L1Q9GZT8 377 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 F8VZ95 297 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 PIK3R2O00459 728 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 GARTP22102 1010 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 SLC12A6Q9UHW9 1150 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 GTPBP10A4D1E9 387 aaKnown RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 CDH6P55285 790 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 PPP2R2AP63151 447 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 MYBPC2Q14324 1141 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 RAB3IPQ96QF0 476 aaPredicted RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 GLIS2Q9BZE0 524 aaPredicted RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 HPCAL4Q9UM19 191 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 HP1BP3Q5SSJ5 553 aaPredicted RBP16.12■□□□□ 0.17
SYMPK-202ENST00000593504 RCOR2Q8IZ40 523 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 NKX2-3Q8TAU0 364 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 TTC25Q96NG3 672 aa16.12■□□□□ 0.17
SYMPK-202ENST00000593504 IQANK1A0A1B0GTG1 560 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 CDC42EP1Q00587 391 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 THEM5Q8N1Q8 247 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 NID2Q14112 1375 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 DDNO94850 711 aaPredicted RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 GTF2H1P32780 548 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 BCAR1P56945 870 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 CUL2Q13617 745 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 WDR91A4D1P6 747 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 TMEM150BA6NC51 233 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 RASA4BC9J798 803 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 RASA4O43374 803 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 MYCP01106 439 aaPredicted RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 MAPTP10636 758 aaKnown RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 FGFR4P22455 802 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 SHROOM1Q2M3G4 852 aaPredicted RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 GTF3C4Q9UKN8 822 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 ARFGEF2Q9Y6D5 1785 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 ACAD10Q6JQN1 1059 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 RWDD4Q6NW29 188 aaKnown RBP16.11■□□□□ 0.17
SYMPK-202ENST00000593504 RAPH1Q70E73 1250 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 STAP1Q9ULZ2 295 aa16.11■□□□□ 0.17
SYMPK-202ENST00000593504 ROBO1Q9Y6N7 1651 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 ARSEP51690 589 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 FBXO16Q8IX29 292 aaPredicted RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 LMNTD2Q8IXW0 634 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SRRM1Q8IYB3 904 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 DNERQ8NFT8 737 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SPATA20Q8TB22 786 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 HNRNPLLQ8WVV9 542 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 MMTAG2Q9BU76 263 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 CLTAP09496 248 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 PRLRP16471 622 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 OAZ1P54368 228 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 CDR2Q01850 454 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 ROR1Q01973 937 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 NUGGCQ68CJ6 796 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 TRIM42Q8IWZ5 723 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 TMC2Q8TDI7 906 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 DNAJC19Q96DA6 116 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 DHX35Q9H5Z1 703 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 DDX42Q86XP3 938 aaKnown RBP eCLIP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 JAMLQ86YT9 394 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 TAS1R2Q8TE23 839 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 PHRF1Q9P1Y6 1649 aaKnown RBP16.1■□□□□ 0.17
SYMPK-202ENST00000593504 LPXNO60711 386 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 PSMD10O75832 226 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 LCP1P13796 627 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 RGS7P49802 495 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 CYP24A1Q07973 514 aa16.1■□□□□ 0.17
SYMPK-202ENST00000593504 PDIA2Q13087 525 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms