RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PTK2Q05397 1052 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 BIRC3Q13489 604 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
CCBE1-203ENST00000589116 SEZ6Q53EL9 994 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 PPM1KQ8N3J5 372 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 HELQQ8TDG4 1101 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
CCBE1-203ENST00000589116 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
CCBE1-203ENST00000589116 PCDHA13Q9Y5I0 950 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 RALGAPA2Q2PPJ7 1873 aa13.01□□□□□ -0.33
CCBE1-203ENST00000589116 PJA2O43164 708 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 CSDE1O75534 798 aaKnown RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 TERF1P54274 439 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 GNG11P61952 73 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 CYP27A1Q02318 531 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 KIF5AQ12840 1032 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 ENOX2Q16206 610 aaKnown RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 ARHGAP44Q17R89 818 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 DUOXA2Q1HG44 320 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 CCSAPQ6IQ19 270 aaPredicted RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 ZNF571Q7Z3V5 609 aaPredicted RBP13□□□□□ -0.33
CCBE1-203ENST00000589116 SHC3Q92529 594 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 ZNF592Q92610 1267 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 CPB2Q96IY4 423 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 OSMRQ99650 979 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 DNAI1Q9UI46 699 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 BRCA2P51587 3418 aa13□□□□□ -0.33
CCBE1-203ENST00000589116 A0A0U1RQJ8 604 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CABYRO75952 493 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 VNN1O95497 513 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ASGR1P07306 291 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 MAGEA1P43355 309 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 GFPT1Q06210 699 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 SNX17Q15036 470 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 NOTUMQ6P988 496 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 RNF180Q86T96 592 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 FAM71AQ8IYT1 594 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CEP120Q8N960 986 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 OR5B17Q8NGF7 314 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ATRIPQ8WXE1 791 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 KREMEN1Q96MU8 473 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ASB7Q9H672 318 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CITO14578 2027 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 FRMPD3Q5JV73 1810 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 A0A087X0T9 212 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 M0QZ92 97 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 PHACTR2O75167 634 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 LRRN2O75325 713 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TNNC2P02585 160 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 FAM228BP0C875 321 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CXCL8P10145 99 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TBXAS1P24557 533 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 GRM5P41594 1212 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 NCOA4Q13772 614 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 KCNA10Q16322 511 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 RPAINQ86UA6 219 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CDR2LQ86X02 465 aaPredicted RBP12.99□□□□□ -0.33
CCBE1-203ENST00000589116 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 CD302Q8IX05 232 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 SYT11Q9BT88 431 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 MTMR12Q9C0I1 747 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 COL6A3P12111 3177 aa12.99□□□□□ -0.33
CCBE1-203ENST00000589116 PNMA6AP0CW24 399 aaPredicted RBP12.98□□□□□ -0.33
CCBE1-203ENST00000589116 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
CCBE1-203ENST00000589116 CASQ1P31415 396 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 OSTNP61366 133 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
CCBE1-203ENST00000589116 NAB2Q15742 525 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 SERINC5Q86VE9 423 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 PPP1R13LQ8WUF5 828 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms