RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CTAGE15A4D2H0 777 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 BTNL10A8MVZ5 291 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 H3BRB1 525 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 OGTO15294 1046 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ADCY6O43306 1168 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 SRGAP2O75044 1071 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PHACTR2O75167 634 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TOM1L1O75674 476 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PALMO75781 387 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CLSTN1O94985 981 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 C4BPAP04003 597 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CTAGE8P0CG41 777 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 HOXD8P13378 290 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 RGS2P41220 211 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TNFSF9P41273 254 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 NOP2P46087 812 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PTENP60484 403 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CLDN10P78369 228 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 MBTD1Q05BQ5 628 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 GRIK4Q16099 956 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 DGKDQ16760 1214 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ZNF568Q3ZCX4 644 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ZACNQ401N2 412 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ATF7IP2Q5U623 682 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TDRD10Q5VZ19 366 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 MTHFD1LQ6UB35 978 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 MPZL3Q6UWV2 235 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 C17orf99Q6UX52 265 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TSHZ1Q6ZSZ6 1077 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 RSRC2Q7L4I2 434 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CTAGE6Q86UF2 777 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CTAGE4Q8IX94 777 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PDCL2Q8N4E4 241 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 LINC01465Q8N7H1 131 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 SHC3Q92529 594 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ELMO3Q96BJ8 720 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CAPZA3Q96KX2 299 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 FAM81BQ96LP2 452 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 PPP1R16BQ96T49 567 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 SYT11Q9BT88 431 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 FZD8Q9H461 694 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 TUT1Q9H6E5 874 aaKnown RBP9.44□□□□□ -0.9
SMAD4-206ENST00000588860 ZFYVE28Q9HCC9 887 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 INTUQ9ULD6 942 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 SNX12Q9UMY4 172 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 LHX6Q9UPM6 363 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 HYOU1Q9Y4L1 999 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 NCANO14594 1321 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 SZT2Q5T011 3432 aa9.44□□□□□ -0.9
SMAD4-206ENST00000588860 GRID2IPA4D2P6 1211 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 ACKR2O00590 384 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 ABLIM1O14639 778 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 TNPO2O14787 897 aaKnown RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 CYP26A1O43174 497 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 B4GALT5O43286 388 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 FAM189A1O60320 539 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 SGPL1O95470 568 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 VNN1O95497 513 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 FTCDO95954 541 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 KRT5P13647 590 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 CYP2B6P20813 491 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 TMOD1P28289 359 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 GALCP54803 685 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 INHBEP58166 350 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 MCL1Q07820 350 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 SREBF2Q12772 1141 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 CRHR2Q13324 411 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 CCL14Q16627 93 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 TAF3Q5VWG9 929 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 ENOSF1Q7L5Y1 443 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 DHX38Q92620 1227 aaKnown RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 RABGGTAQ92696 567 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 APBA2Q99767 749 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 MINDY3Q9H8M7 445 aa9.43□□□□□ -0.9
SMAD4-206ENST00000588860 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-206ENST00000588860 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 A0A087WZ62 844 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 A0A0A6YYK5 440 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 FAM170AA1A519 330 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 C2orf72A6NCS6 295 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 FAM155AB1AL88 458 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-206ENST00000588860 ZNF185O15231 689 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 ZEB2O60315 1214 aa9.42□□□□□ -0.9
SMAD4-206ENST00000588860 VTNP04004 478 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms