RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	PARD3B	Q8TEW8	1205 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	ZNF653	Q96CK0	615 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	TLCD1	Q96CP7	247 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	RMDN3	Q96TC7	470 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	NUP85	Q9BW27	656 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	NSRP1	Q9H0G5	558 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	C1orf112	Q9NSG2	853 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	ZDHHC18	Q9NUE0	388 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	RAB20	Q9NX57	234 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	WHRN	Q9P202	907 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	SLC12A6	Q9UHW9	1150 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	NOVA2	Q9UNW9	492 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	TRPC6	Q9Y210	931 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	ATP8A1	Q9Y2Q0	1164 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	NFASC	O94856	1347 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	SMCHD1	A6NHR9	2005 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516		H0YHG0	523 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	RGS16	O15492	202 aa	Predicted RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	ECEL1	O95672	775 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	LDHA	P00338	332 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	CYP11B1	P15538	503 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	TAL1	P17542	331 aa	Predicted RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	ITIH2	P19823	946 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	CNGA1	P29973	690 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	COIL	P38432	576 aa	Predicted RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	PTGIR	P43119	386 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	MRPS9	P82933	396 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	PTP4A2	Q12974	167 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	TRADD	Q15628	312 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	GKAP1	Q5VSY0	366 aa	Predicted RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	DCAF12L1	Q5VU92	463 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	SLFN12L	Q6IEE8	588 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	SAMD1	Q6SPF0	538 aa	Predicted RBP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	CCDC105	Q8IYK2	499 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	CACNA2D3	Q8IZS8	1091 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	GPD1L	Q8N335	351 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	ANKS4B	Q8N8V4	417 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	SH3TC2	Q8TF17	1288 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	ATP8B4	Q8TF62	1192 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	SLC20A1	Q8WUM9	679 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	CD101	Q93033	1021 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	PDCD2L	Q9BRP1	358 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	FOXP3	Q9BZS1	431 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	TMEM39B	Q9GZU3	492 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	PLEKHA4	Q9H4M7	779 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	LRRC19	Q9H756	370 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	PXMP2	Q9NR77	195 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	FBXO28	Q9NVF7	368 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	TMEM51	Q9NW97	253 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	COG5	Q9UP83	839 aa		15.02	■□□□□ -0
NEDD4L-223	ENST00000588516	IGSF9B	Q9UPX0	1349 aa		15.02	□□□□□ -0.01
NEDD4L-223	ENST00000588516	DENND3	A2RUS2	1198 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	C5orf60	A6NFR6	353 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	NFIB	O00712	420 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	BACH1	O14867	736 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	SGPL1	O95470	568 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	GAS8	O95995	478 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MYCL	P12524	364 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	NPTX2	P47972	431 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	PLTP	P55058	493 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MAGOH	P61326	146 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	DLG4	P78352	724 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	LMNB2	Q03252	620 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CYP24A1	Q07973	514 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CLEC16A	Q2KHT3	1053 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	GNPTAB	Q3T906	1256 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	C1orf220	Q5T0J3	134 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MMS22L	Q6ZRQ5	1243 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MIGA2	Q7L4E1	593 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MAEA	Q7L5Y9	396 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CPLX4	Q7Z7G2	160 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	NOP9	Q86U38	636 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CCDC50	Q8IVM0	306 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	SUGP1	Q8IWZ8	645 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	NSUN6	Q8TEA1	469 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	POMGNT1	Q8WZA1	660 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	ALG3	Q92685	438 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	VCPIP1	Q96JH7	1222 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	TRIM51	Q9BSJ1	452 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CELF4	Q9BZC1	486 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	NEUROG2	Q9H2A3	272 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	BCAS3	Q9H6U6	928 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MRPL47	Q9HD33	250 aa	Known RBP	15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	TAS2R14	Q9NYV8	317 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	PCDHB2	Q9Y5E7	798 aa		15.01	□□□□□ -0.01
NEDD4L-223	ENST00000588516	TMEM110-MUSTN1	A8MSY1	372 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	PHF20L1	A8MW92	1017 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	FSCN2	O14926	492 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CYP26A1	O43174	497 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CHRNB2	P17787	502 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	EIF2AK2	P19525	551 aa	Known RBP	15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	MAPK4	P31152	587 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	AP3M2	P53677	418 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	RPS6	P62753	249 aa	Known RBP	15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	FMO1	Q01740	532 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	CENPC	Q03188	943 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	STRN3	Q13033	797 aa		15	□□□□□ -0.01
NEDD4L-223	ENST00000588516	PPP1R7	Q15435	360 aa		15	□□□□□ -0.01

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