RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EHBP1Q8NDI1 1231 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 NEK11Q8NG66 645 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 CACTINQ8WUQ7 758 aaKnown RBP12.23□□□□□ -0.45
VMP1-207ENST00000588131 LINC01599Q8WXQ3 324 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 ELMO3Q96BJ8 720 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 SCLYQ96I15 445 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 SNX27Q96L92 541 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 ADAM2Q99965 735 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 NUP58Q9BVL2 599 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 IFIH1Q9BYX4 1025 aaKnown RBP12.23□□□□□ -0.45
VMP1-207ENST00000588131 MTMR12Q9C0I1 747 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 COQ4Q9Y3A0 265 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
VMP1-207ENST00000588131 CITO14578 2027 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 AKR1B15C9JRZ8 316 aaPredicted RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 HLA-DRAP01903 254 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 CLTBP09497 229 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 CYP2C18P33260 490 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 YARSP54577 528 aaKnown RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 GSDMDP57764 484 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 TFAMQ00059 246 aaKnown RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 BIRC3Q13489 604 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 RTN4RL1Q86UN2 441 aaPredicted RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 CCDC150Q8NCX0 1101 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 ZMAT2Q96NC0 199 aaKnown RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 KCNF1Q9H3M0 494 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 ASB7Q9H672 318 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 PLCB1Q9NQ66 1216 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.45
VMP1-207ENST00000588131 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 RAB20Q9NX57 234 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 PARP2Q9UGN5 583 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 FHOD1Q9Y613 1164 aa12.22□□□□□ -0.45
VMP1-207ENST00000588131 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
VMP1-207ENST00000588131 TMEM191BP0C7N4 346 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
VMP1-207ENST00000588131 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
VMP1-207ENST00000588131 KRT9P35527 623 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PIK3CAP42336 1068 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 GUCY2FP51841 1108 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 AP3M2P53677 418 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 POLR2FP61218 127 aaKnown RBP12.21□□□□□ -0.45
VMP1-207ENST00000588131 CETN1Q12798 172 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 LRMPQ12912 555 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 TMEM132DQ14C87 1099 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PLEKHG4Q58EX7 1191 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 XKR4Q5GH76 650 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 GLRA4Q5JXX5 417 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 IQCEQ6IPM2 695 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 ALKAL1Q6UXT8 129 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 MRPL10Q7Z7H8 261 aaKnown RBP12.21□□□□□ -0.45
VMP1-207ENST00000588131 ARHGEF19Q8IW93 802 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 CD302Q8IX05 232 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 BAP1Q92560 729 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 LPPQ93052 612 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 ANKRD36BP1Q96IX9 119 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PI4K2AQ9BTU6 479 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 TRAIPQ9BWF2 469 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PLEKHA5Q9HAU0 1116 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 CEP72Q9P209 647 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
VMP1-207ENST00000588131 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
VMP1-207ENST00000588131 A0A0U1RQF3 1178 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 TRIM43BA6NCK2 446 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ZNF623O75123 536 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 PHACTR2O75167 634 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 CST3P01034 146 aaPredicted RBP12.2□□□□□ -0.46
VMP1-207ENST00000588131 TNNC2P02585 160 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 CXCL10P02778 98 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 TPM1P09493 284 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ITGA4P13612 1032 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 UCHL3P15374 230 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ITGB8P26012 769 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 RAB27AP51159 221 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ZBED6P86452 979 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 NCOA4Q13772 614 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 E4F1Q66K89 784 aaPredicted RBP12.2□□□□□ -0.46
VMP1-207ENST00000588131 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 AGMOQ6ZNB7 445 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 GPIHBP1Q8IV16 184 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 C1orf127Q8N9H9 656 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 CXorf38Q8TB03 319 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms