RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 TRAPPC3O43617 180 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 TOM1L1O75674 476 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 MAPTP10636 758 aaKnown RBP18.44■□□□□ 0.54
CCDC130-206ENST00000587019 FGFR3P22607 806 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 UBA7P41226 1012 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 SOX4Q06945 474 aaPredicted RBP18.44■□□□□ 0.54
CCDC130-206ENST00000587019 GET4Q7L5D6 327 aaPredicted RBP18.44■□□□□ 0.54
CCDC130-206ENST00000587019 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 CALML4Q96GE6 196 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 ACAP3Q96P50 834 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 KCNK12Q9HB15 430 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 CNTN3Q9P232 1028 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 LARSQ9P2J5 1176 aaKnown RBP18.44■□□□□ 0.54
CCDC130-206ENST00000587019 EPS15L1Q9UBC2 864 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 MTRRQ9UBK8 725 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 ODF2LQ9ULJ1 636 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 DUSP12Q9UNI6 340 aa18.44■□□□□ 0.54
CCDC130-206ENST00000587019 DOCK8Q8NF50 2099 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
CCDC130-206ENST00000587019 H0YCG3 227 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 ADAM12O43184 909 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 C8AP07357 584 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 HNRNPA1P09651 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCDC130-206ENST00000587019 KCNE1P15382 129 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 HOXA9P31269 272 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
CCDC130-206ENST00000587019 PPM1LQ5SGD2 360 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 ALKAL1Q6UXT8 129 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 ZPBP2Q6X784 338 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 DDX27Q96GQ7 796 aaKnown RBP18.43■□□□□ 0.54
CCDC130-206ENST00000587019 MYADMQ96S97 322 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 MFSD1Q9H3U5 465 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 WDFY4Q6ZS81 3184 aa18.43■□□□□ 0.54
CCDC130-206ENST00000587019 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
CCDC130-206ENST00000587019 NPHP3-ACAD11A0A0J9YXS1 232 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 PODXLO00592 558 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 IGFBP6P24592 240 aaPredicted RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 TKTP29401 623 aaKnown RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 LONP1P36776 959 aaKnown RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 BRCC3P46736 316 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 NCKAP1LP55160 1127 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 CUL4AQ13619 759 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 RAB33AQ14088 237 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 ALYREFQ86V81 257 aaKnown RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 GPBP1Q86WP2 473 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 RASSF8Q8NHQ8 419 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 ZMAT2Q96NC0 199 aaKnown RBP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 REEP2Q9BRK0 252 aa18.42■□□□□ 0.54
CCDC130-206ENST00000587019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC130-206ENST00000587019 I3L4J1 428 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 PDCP20941 246 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 OR1D2P34982 312 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 MRE11P49959 708 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 NUBP1P53384 320 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 MCL1Q07820 350 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 TCF15Q12870 199 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
CCDC130-206ENST00000587019 ARSHQ5FYA8 562 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 CD300LGQ6UXG3 332 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 SLC7A14Q8TBB6 771 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 KCNN1Q92952 543 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 BICD1Q96G01 975 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 BACE2Q9Y5Z0 518 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 CDY1Q9Y6F8 540 aa18.41■□□□□ 0.54
CCDC130-206ENST00000587019 K7ENM7 598 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 CLDN3O15551 220 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 XYLBO75191 536 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 FAM13AO94988 1023 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 POU2F2P09086 479 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 PLCG1P19174 1290 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 SCP2P22307 547 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 FSHRP23945 695 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 MATR3P43243 847 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC130-206ENST00000587019 GRIN1Q05586 938 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 KARSQ15046 597 aaKnown RBP18.4■□□□□ 0.54
CCDC130-206ENST00000587019 HAUS6Q7Z4H7 955 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 GRASPQ7Z6J2 395 aaPredicted RBP18.4■□□□□ 0.54
CCDC130-206ENST00000587019 TMEM105Q8N8V8 129 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 LRRC15Q8TF66 581 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 NXPE3Q969Y0 559 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 BLOC1S4Q9NUP1 217 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 NUB1Q9Y5A7 615 aa18.4■□□□□ 0.54
CCDC130-206ENST00000587019 HNRNPDLO14979 420 aaKnown RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 SYN3O14994 580 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 CCL16O15467 120 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 MEFVO15553 781 aaPredicted RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 KRT18P05783 430 aaKnown RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 LAMP2P13473 410 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 RPL9P32969 192 aaKnown RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 LIG4P49917 911 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 AXDND1Q5T1B0 1012 aaPredicted RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 ASTLQ6HA08 431 aaPredicted RBP18.39■□□□□ 0.53
CCDC130-206ENST00000587019 RSAD2Q8WXG1 361 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 RAD54LQ92698 747 aa18.39■□□□□ 0.53
CCDC130-206ENST00000587019 C18orf25Q96B23 403 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms