RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ZNF227Q86WZ6 799 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 VPS37DQ86XT2 251 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 RBM12BQ8IXT5 1001 aaKnown RBP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 RPUSD2Q8IZ73 545 aaKnown RBP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF654Q8IZM8 581 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 D2HGDHQ8N465 521 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ARHGAP45Q92619 1136 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ZDHHC5Q9C0B5 715 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 COA1Q9GZY4 146 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 GPR27Q9NS67 375 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 CNOT7Q9UIV1 285 aaKnown RBP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 HDAC9Q9UKV0 1011 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 UTYO14607 1347 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 MROH5Q6ZUA9 1318 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ADAMTSL1Q8N6G6 1762 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 YDJCA8MPS7 323 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 TAF5LO75529 589 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 EPS15P42566 896 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 GNL2Q13823 731 aaKnown RBP5.66□□□□□ -1.5
ZNF540-204ENST00000586792 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
ZNF540-204ENST00000586792 WDR72Q3MJ13 1102 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 GLIPR1L2Q4G1C9 344 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 CAVIN4Q5BKX8 364 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 DENND5AQ6IQ26 1287 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 CNTROBQ8N137 903 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 TMEM145Q8NBT3 493 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 AGBL3Q8NEM8 1001 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 DPF2Q92785 391 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 DCPSQ96C86 337 aaKnown RBP5.66□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF764Q96H86 408 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-204ENST00000586792 ABT1Q9ULW3 272 aaKnown RBP5.66□□□□□ -1.5
ZNF540-204ENST00000586792 PSME4Q14997 1843 aa5.66□□□□□ -1.5
ZNF540-204ENST00000586792 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 BCAR3O75815 825 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 LTFP02788 710 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 HMGCRP04035 888 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 TRIM27P14373 513 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 PTGS2P35354 604 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 EPHA5P54756 1037 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 RRP1BQ14684 758 aaKnown RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 TBR1Q16650 682 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 RABL6Q3YEC7 729 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 SLC35F1Q5T1Q4 408 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 STRIP1Q5VSL9 837 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 CXXC5Q7LFL8 322 aaKnown RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 ITPRIPQ8IWB1 547 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 CFHR4Q92496 578 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 USP44Q9H0E7 712 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF408Q9H9D4 720 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 DSEQ9UL01 958 aa5.65□□□□□ -1.5
ZNF540-204ENST00000586792 LRRFIP2Q9Y608 721 aaKnown RBP5.65□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF609O15014 1411 aa5.65□□□□□ -1.51
ZNF540-204ENST00000586792 PMS2P1A4D2B8 440 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 MASP2O00187 686 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 GNAI2P04899 355 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 VIL1P09327 827 aaKnown RBP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 IFIT1P09914 478 aaKnown RBP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 GNAT1P11488 350 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 SLC5A1P13866 664 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 MMP14P50281 582 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 HDLBPQ00341 1268 aaKnown RBP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 UBE4AQ14139 1066 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 PUM3Q15397 648 aaKnown RBP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 TTLL5Q6EMB2 1281 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 GPRASP2Q96D09 838 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 MEIS3Q99687 375 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 SIL1Q9H173 461 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 CHMP4BQ9H444 224 aaKnown RBP5.64□□□□□ -1.51
ZNF540-204ENST00000586792 RIOX1Q9H6W3 641 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 ZSWIM4Q9H7M6 989 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 CCSER2Q9H7U1 834 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 MYOZ2Q9NPC6 264 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 GGA3Q9NZ52 723 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 ARAP2Q8WZ64 1704 aa5.64□□□□□ -1.51
ZNF540-204ENST00000586792 EYA2O00167 538 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 PDE8BO95263 885 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 LMNAP02545 664 aaKnown RBP5.63□□□□□ -1.51
ZNF540-204ENST00000586792 KLRK1P26718 216 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 NF2P35240 595 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 IL15P40933 162 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-204ENST00000586792 ECE1P42892 770 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 GRM1Q13255 1194 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 OS9Q13438 667 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-204ENST00000586792 DACT2Q5SW24 774 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 SYCE2Q6PIF2 218 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 RSPO2Q6UXX9 243 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-204ENST00000586792 C15orf52Q6ZUT6 534 aaKnown RBP5.63□□□□□ -1.51
ZNF540-204ENST00000586792 KCTD1Q719H9 257 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 KRT26Q7Z3Y9 468 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 ANKRD35Q8N283 1001 aa5.63□□□□□ -1.51
ZNF540-204ENST00000586792 TMEM57Q8N5G2 664 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms