RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 HPS3Q969F9 1004 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 MROH7-TTC4A0A0A0MT08 1334 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 MAP4P27816 1152 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 MRPL28Q13084 256 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 LONP2Q86WA8 852 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 TSSK1BQ9BXA7 367 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 CLCA2Q9UQC9 943 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
RAB11FIP4-210ENST00000585058 ARIH2O95376 493 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CHN1P15882 459 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 GRIK1P39086 918 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MED21Q13503 144 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 USP33Q8TEY7 942 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CPA5Q8WXQ8 436 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 INPP5DQ92835 1189 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZNF560Q96MR9 790 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ARAP3Q8WWN8 1544 aa13.96□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 USP6P35125 1406 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ABCE1P61221 599 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C5orf58C9J3I9 102 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SLC1A1P43005 524 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 AARS2Q5JTZ9 985 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DEPDC1Q5TB30 811 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PKN3Q6P5Z2 889 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SERPINB4P48594 390 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 AP3M2P53677 418 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 WDR72Q3MJ13 1102 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ELMO2Q96JJ3 720 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ATP7BP35670 1465 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ADCY3O60266 1144 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SERPINI2O75830 405 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ASMTLO95671 621 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 LRRC8BQ6P9F7 803 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PLEKHM3Q6ZWE6 761 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SLC35G2Q8TBE7 412 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SNX12Q9UMY4 172 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CLTCL1P53675 1640 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 E2F8A0AVK6 867 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C3orf70A6NLC5 250 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PPP1R37O75864 691 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 AGTP01019 485 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RGS7P49802 495 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RCAN1P53805 252 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SYTL3Q4VX76 610 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PLD3Q8IV08 490 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PHF21AQ96BD5 680 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ABCC3O15438 1527 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RCOR2Q8IZ40 523 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RAB42Q8N4Z0 105 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RBM15Q96T37 977 aaKnown RBP eCLIP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PIM2Q9P1W9 311 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MYO3BQ8WXR4 1341 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 STX3Q13277 289 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IL17RAQ96F46 866 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 EPN3Q9H201 632 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RGL1Q9NZL6 768 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZC3H7BQ9UGR2 993 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PCDHA10Q9Y5I2 948 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZNF473Q8WTR7 871 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DPF2Q92785 391 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MRPL1Q9BYD6 325 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PCMTD2Q9NV79 361 aa13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SMG5Q9UPR3 1016 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DEAF1O75398 565 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms