RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 VSTM5A8MXK1 200 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 C9IYK1 514 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 ARHGAP6O43182 974 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 C8BP07358 591 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 MYL3P08590 195 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 C6P13671 934 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 KCNA3P22001 575 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 AMPHP49418 695 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 LRRC41Q15345 812 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 SLC4A8Q2Y0W8 1093 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 LSM12Q3MHD2 195 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 TBC1D10BQ4KMP7 808 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 VWA3BQ502W6 1294 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 HSP90AB3PQ58FF7 597 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 LY6G5CQ5SRR4 150 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 YOD1Q5VVQ6 348 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 CTU1Q7Z7A3 348 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 MORC1Q86VD1 984 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 NXPE1Q8N323 547 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 TP53I13Q8NBR0 393 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 COG1Q8WTW3 980 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 TTC17Q96AE7 1141 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 EXOC2Q96KP1 924 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 KCNH6Q9H252 994 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 FAM204AQ9H8W3 233 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 REXO2Q9Y3B8 237 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 TJP1Q07157 1748 aa2.28□□□□□ -2.04
SMCHD1-211ENST00000584897 FANCIQ9NVI1 1328 aa2.28□□□□□ -2.05
SMCHD1-211ENST00000584897 GSG1L2A8MUP6 293 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 M0R2C6 588 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 DTNBO60941 627 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 FKBP9O95302 570 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 KRT15P19012 456 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 GRK3P35626 688 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 NT5C2P49902 561 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SCAND1P57086 179 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ROM1Q03395 351 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PCBP1Q15365 356 aaKnown RBP eCLIP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 MAP9Q49MG5 647 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 KIAA1614Q5VZ46 1190 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 KRT40Q6A162 431 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 KLHDC10Q6PID8 442 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 FKBP9P1Q75LS8 142 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 C16orf59Q7L2K0 433 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CATIPQ7Z7H3 387 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 Q8N1Y9 231 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CISD2Q8N5K1 135 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SAMD3Q8N6K7 520 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ANKRD42Q8N9B4 389 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SUPT20HQ8NEM7 779 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF483Q8TF39 744 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 EDAQ92838 391 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SORCS2Q96PQ0 1159 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PHF20Q9BVI0 1012 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 LRCH1Q9Y2L9 728 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TRAF6Q9Y4K3 522 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CEMIPQ8WUJ3 1361 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CACNA1FO60840 1977 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TCRBV5S2A0A599 114 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 F5H423 210 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 B4GALT4O60513 344 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 RAD17O75943 681 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CENPBP07199 599 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SDSP20132 328 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SDHBP21912 280 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ETV4P43268 484 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ATP2B3Q16720 1220 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 COBLL1Q53SF7 1204 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 C1orf141Q5JVX7 400 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 C10orf62Q5T681 223 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PDZD4Q76G19 769 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TEX2Q8IWB9 1127 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CPXCR1Q8N123 301 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 MSL3Q8N5Y2 521 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ENAHQ8N8S7 591 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 IGSF22Q8N9C0 903 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ZG16BQ96DA0 208 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 MRGPRX3Q96LB0 322 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNJ15Q99712 375 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 GORASP1Q9BQQ3 440 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 BTBD2Q9BX70 525 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TRIM39Q9HCM9 518 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 RIC8BQ9NVN3 520 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PNMA2Q9UL42 364 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ANKRD6Q9Y2G4 727 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 LAS1LQ9Y4W2 734 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 PLEKHH1Q9ULM0 1364 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC189A1A4V9 331 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF202O95125 648 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CRTAMO95727 393 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 GYPEP15421 78 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ITGA1P56199 1179 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF460Q14592 562 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 SPDYE7PQ495Y7 208 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 FIGNQ5HY92 759 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TEPPQ6URK8 271 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC149Q6ZUS6 474 aa2.27□□□□□ -2.05
SMCHD1-211ENST00000584897 TTC8Q8TAM2 541 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms