RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TBCKQ8TEA7 893 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 SLC7A3Q8WY07 619 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 PHKBQ93100 1093 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 SHDQ96IW2 340 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 CEP170P1Q96L14 293 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 GAD1Q99259 594 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 SPOCK3Q9BQ16 436 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 HINFPQ9BQA5 517 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 RPP25Q9BUL9 199 aaKnown RBP5.95□□□□□ -1.46
VAPA-207ENST00000583879 COLEC11Q9BWP8 271 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 RNF26Q9BY78 433 aaPredicted RBP5.95□□□□□ -1.46
VAPA-207ENST00000583879 C22orf23Q9BZE7 217 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 DHX33Q9H6R0 707 aaKnown RBP5.95□□□□□ -1.46
VAPA-207ENST00000583879 MINDY3Q9H8M7 445 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 SH3GLB2Q9NR46 395 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 ARHGEF3Q9NR81 526 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.95□□□□□ -1.46
VAPA-207ENST00000583879 MARCH5Q9NX47 278 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 VPS54Q9P1Q0 977 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 FNIP2Q9P278 1114 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 PRG3Q9Y2Y8 225 aaPredicted RBP5.95□□□□□ -1.46
VAPA-207ENST00000583879 COL4A3BPQ9Y5P4 624 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 ZFP37Q9Y6Q3 630 aaPredicted RBP5.95□□□□□ -1.46
VAPA-207ENST00000583879 VPS13AQ96RL7 3174 aa5.95□□□□□ -1.46
VAPA-207ENST00000583879 CACNA1HO95180 2353 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 KANSL1LA0AUZ9 987 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 ARL5CA6NH57 179 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 M0R2N6 131 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 EML1O00423 815 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 TGM5O43548 720 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 DKC1O60832 514 aaKnown RBP eCLIP5.94□□□□□ -1.46
VAPA-207ENST00000583879 KINO60870 393 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 LRRN2O75325 713 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 TDP2O95551 362 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 P4HBP07237 508 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 CPA1P15085 419 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 GLULP15104 373 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 IFNAR1P17181 557 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 SDHBP21912 280 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 AXLP30530 894 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 QARSP47897 775 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 PTK2Q05397 1052 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 NCBP1Q09161 790 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 LAMTOR4Q0VGL1 99 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 SNW1Q13573 536 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 HTR4Q13639 388 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 PCBP1Q15365 356 aaKnown RBP eCLIP5.94□□□□□ -1.46
VAPA-207ENST00000583879 RSPO4Q2I0M5 234 aaPredicted RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 USP41Q3LFD5 358 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 ZNF528Q3MIS6 628 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 SLC44A4Q53GD3 710 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 FOXR1Q6PIV2 292 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 GET4Q7L5D6 327 aaPredicted RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 LYSMD3Q7Z3D4 306 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 FBXL16Q8N461 479 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 RNF149Q8NC42 400 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 GALNT6Q8NCL4 622 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 GSTCDQ8NEC7 633 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 ST13P5Q8NFI4 369 aaPredicted RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 PJA1Q8NG27 643 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 ETNPPLQ8TBG4 499 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 PSPC1Q8WXF1 523 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 FGF14Q92915 247 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 BRF1Q92994 677 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 TMEM143Q96AN5 459 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 MBOAT7Q96N66 472 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 SLC26A6Q9BXS9 759 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 EIF2AQ9BY44 585 aaKnown RBP5.94□□□□□ -1.46
VAPA-207ENST00000583879 BCO2Q9BYV7 579 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 GPR62Q9BZJ7 368 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 FOXQ1Q9C009 403 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 FBXO4Q9UKT5 387 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 PCDHA4Q9UN74 947 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 PPME1Q9Y570 386 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 IPPQ9Y573 584 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 NUMBLQ9Y6R0 609 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 MYO10Q9HD67 2058 aa5.94□□□□□ -1.46
VAPA-207ENST00000583879 FAM170BA6NMN3 283 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 F8W810 466 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 LAMTOR5O43504 91 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 TADA2AO75478 443 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 ERLIN2O94905 339 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 PDIA3P30101 505 aaKnown RBP5.93□□□□□ -1.46
VAPA-207ENST00000583879 YWHABP31946 246 aaKnown RBP5.93□□□□□ -1.46
VAPA-207ENST00000583879 MLH1P40692 756 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 SCNN1GP51170 649 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 EVCP57679 992 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 PTENP60484 403 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 PRKCQQ04759 706 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 POU5F1BQ06416 359 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 PPP2R5CQ13362 524 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 BMP2KLQ5H9B9 411 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 FUT10Q6P4F1 479 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 NOTUMQ6P988 496 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 BLOC1S2Q6QNY1 142 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 MOXD1Q6UVY6 613 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 PARM1Q6UWI2 310 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 OTUD6AQ7L8S5 288 aa5.93□□□□□ -1.46
VAPA-207ENST00000583879 GRASPQ7Z6J2 395 aaPredicted RBP5.93□□□□□ -1.46
VAPA-207ENST00000583879 FERMT3Q86UX7 667 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms