RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GTF2H1P32780 548 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 DCAF17Q5H9S7 520 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TCERG1LQ5VWI1 586 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PGBD4Q96DM1 585 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TRIM5Q9C035 493 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 XPO4Q9C0E2 1151 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 GIT1Q9Y2X7 761 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LGALS16A8MUM7 142 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TEX33O43247 280 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CBFA2T2O43439 604 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 STX10O60499 249 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PFKMP08237 780 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PPP3CAQ08209 521 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 IKBKEQ14164 716 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 AGMOQ6ZNB7 445 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LPPQ93052 612 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SNX27Q96L92 541 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CGRRF1Q99675 332 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.439e-16■□□□□ 9
CDK5RAP3-228ENST00000583363 CXCL16Q9H2A7 254 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ELAC1Q9H777 363 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TOPORSQ9NS56 1045 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 INTS13Q9NVM9 706 aa17.71■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ABHD14A-ACY1A0A1B0GW23 586 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PMM2O15305 246 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 C4BPAP04003 597 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ACRP10323 421 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TNNI1P19237 187 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 FMO5P49326 533 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZNF75DP51815 510 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 AP3M2P53677 418 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 UBXN1Q04323 297 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PPIGQ13427 754 aaKnown RBP eCLIP17.7■□□□□ 0.422e-14■■■■■ 28.1
CDK5RAP3-228ENST00000583363 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 WDR49Q8IV35 697 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TSPAN18Q96SJ8 248 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM117Q9H0C3 514 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZNF576Q9H609 170 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 KLK14Q9P0G3 267 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 DERAQ9Y315 318 aa17.7■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ADCY5O95622 1261 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 KCNE1P15382 129 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GCLMP48507 274 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZBTB6Q15916 424 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 DUOXA2Q1HG44 320 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 JADE1Q6IE81 842 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 SV2AQ7L0J3 742 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 EFCAB13Q8IY85 973 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CRIPAKQ8N1N5 446 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 OR5B17Q8NGF7 314 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TIFAQ96CG3 184 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM8AQ9HCN3 771 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PRDM6Q9NQX0 595 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM161AQ9NX61 479 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PCDHB7Q9Y5E2 793 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MUC3AQ02505 3323 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PTPRJQ12913 1337 aa17.69■□□□□ 0.42
CDK5RAP3-228ENST00000583363 SMIM28A0A1B0GU29 152 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GRXCR1A8MXD5 290 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 P4HA2O15460 535 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 N4BP1O75113 896 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 OFD1O75665 1012 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TPM3P06753 285 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 NFICP08651 508 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 KCNMA1Q12791 1236 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 FKBP15Q5T1M5 1219 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 KRT39Q6A163 491 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GSTCDQ8NEC7 633 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CACTINQ8WUQ7 758 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GAD1Q99259 594 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MMRN2Q9H8L6 949 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 RSAD1Q9HA92 442 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 RNF19AQ9NV58 838 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MIOSQ9NXC5 875 aa17.68■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MYO9BQ13459 2157 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CITO14578 2027 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GTPBP10A4D1E9 387 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ARL5CA6NH57 179 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms