RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SMOC2Q9H3U7 446 aa22.92■■□□□ 1.26
CCDC42-203ENST00000581598 KCNK12Q9HB15 430 aa22.92■■□□□ 1.26
CCDC42-203ENST00000581598 SLC38A7Q9NVC3 462 aa22.92■■□□□ 1.26
CCDC42-203ENST00000581598 EPS15L1Q9UBC2 864 aa22.92■■□□□ 1.26
CCDC42-203ENST00000581598 PDCD11Q14690 1871 aaKnown RBP22.92■■□□□ 1.26
CCDC42-203ENST00000581598 SFI1A8K8P3 1242 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 TRAPPC3O43617 180 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 B3GAT3O94766 335 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 PDGFBP01127 241 aaPredicted RBP22.91■■□□□ 1.26
CCDC42-203ENST00000581598 HNRNPA1P09651 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
CCDC42-203ENST00000581598 KCNE1P15382 129 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 MRE11P49959 708 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 CLCNKBP51801 687 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 STRN3Q13033 797 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 ZPBP2Q6X784 338 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 SNX27Q96L92 541 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 ACAP3Q96P50 834 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 FOXD4L1Q9NU39 408 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 CNTN3Q9P232 1028 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 DUSP12Q9UNI6 340 aa22.91■■□□□ 1.26
CCDC42-203ENST00000581598 H0YCG3 227 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 TOM1L1O75674 476 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 MAPTP10636 758 aaKnown RBP22.9■■□□□ 1.26
CCDC42-203ENST00000581598 HOXA9P31269 272 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 RAB33AQ14088 237 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 RTL10Q7L3V2 364 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 NXPE3Q969Y0 559 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 TCHPQ9BT92 498 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 PIDD1Q9HB75 910 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.9■■□□□ 1.26
CCDC42-203ENST00000581598 LARSQ9P2J5 1176 aaKnown RBP22.9■■□□□ 1.26
CCDC42-203ENST00000581598 MTRRQ9UBK8 725 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 ODF2LQ9ULJ1 636 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 BACE2Q9Y5Z0 518 aa22.9■■□□□ 1.26
CCDC42-203ENST00000581598 POU2F2P09086 479 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 MYBP10242 640 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 SCP2P22307 547 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 GBP2P32456 591 aaPredicted RBP22.89■■□□□ 1.25
CCDC42-203ENST00000581598 SOX4Q06945 474 aaPredicted RBP22.89■■□□□ 1.25
CCDC42-203ENST00000581598 TCF15Q12870 199 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 ARSHQ5FYA8 562 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 C3orf58Q8NDZ4 430 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 CALML4Q96GE6 196 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 PLIN2Q99541 437 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 GOLGA2P5Q9HBQ8 144 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 DOCK6Q96HP0 2047 aa22.89■■□□□ 1.25
CCDC42-203ENST00000581598 CACNA1HO95180 2353 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 IGFBP6P24592 240 aaPredicted RBP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 DDIT3P35638 169 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 LONP1P36776 959 aaKnown RBP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 UBA7P41226 1012 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 OSTNP61366 133 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 RAD51AP2Q09MP3 1159 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 NOLC1Q14978 699 aaKnown RBP eCLIP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 UVSSAQ2YD98 709 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 LIN9Q5TKA1 542 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 ANKS3Q6ZW76 656 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 SPRYD3Q8NCJ5 442 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 ZBTB45Q96K62 511 aaPredicted RBP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 ZMAT2Q96NC0 199 aaKnown RBP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 MYADMQ96S97 322 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 IRF2BPLQ9H1B7 796 aa22.88■■□□□ 1.25
CCDC42-203ENST00000581598 ZFP37Q9Y6Q3 630 aaPredicted RBP22.88■■□□□ 1.25
CCDC42-203ENST00000581598 ADAM12O43184 909 aa22.87■■□□□ 1.25
CCDC42-203ENST00000581598 RPL9P32969 192 aaKnown RBP22.87■■□□□ 1.25
CCDC42-203ENST00000581598 MCL1Q07820 350 aa22.87■■□□□ 1.25
CCDC42-203ENST00000581598 PODXLO00592 558 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 MEFVO15553 781 aaPredicted RBP22.86■■□□□ 1.25
CCDC42-203ENST00000581598 C8AP07357 584 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 PDCP20941 246 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 TKTP29401 623 aaKnown RBP22.86■■□□□ 1.25
CCDC42-203ENST00000581598 OR1D2P34982 312 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 CLCN5P51795 746 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 PPM1LQ5SGD2 360 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 BLOC1S4Q9NUP1 217 aa22.86■■□□□ 1.25
CCDC42-203ENST00000581598 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.86■■□□□ 1.25
CCDC42-203ENST00000581598 NPHP3-ACAD11A0A0J9YXS1 232 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 SYN3O14994 580 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 CLDN3O15551 220 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 LAMP2P13473 410 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 BRCC3P46736 316 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 ZNF131P52739 623 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 SF3A1Q15459 793 aaKnown RBP22.85■■□□□ 1.25
CCDC42-203ENST00000581598 SLC10A6Q3KNW5 377 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 ASTLQ6HA08 431 aaPredicted RBP22.85■■□□□ 1.25
CCDC42-203ENST00000581598 HAUS6Q7Z4H7 955 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 LRRC15Q8TF66 581 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 REEP2Q9BRK0 252 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 PLEKHA5Q9HAU0 1116 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 ANKFY1Q9P2R3 1169 aa22.85■■□□□ 1.25
CCDC42-203ENST00000581598 ANHXE9PGG2 379 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 XYLBO75191 536 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 CACNB1Q02641 598 aaPredicted RBP22.84■■□□□ 1.25
CCDC42-203ENST00000581598 AXDND1Q5T1B0 1012 aaPredicted RBP22.84■■□□□ 1.25
CCDC42-203ENST00000581598 SLC8B1Q6J4K2 584 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 RSPO2Q6UXX9 243 aaPredicted RBP22.84■■□□□ 1.25
CCDC42-203ENST00000581598 GPBP1Q86WP2 473 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 TMEM105Q8N8V8 129 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 RAD54LQ92698 747 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms