RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 DLX2Q07687 328 aaPredicted RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 PSMD2Q13200 908 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 PUS10Q3MIT2 529 aaKnown RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 FAM26FQ5R3K3 315 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 PLPP4Q5VZY2 271 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 KRBA2Q6ZNG9 492 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 VN1R2Q8NFZ6 395 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 ASB7Q9H672 318 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 ENTPD7Q9NQZ7 604 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 TBC1D7Q9P0N9 293 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 FNIP2Q9P278 1114 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 PRG3Q9Y2Y8 225 aaPredicted RBP13.77□□□□□ -0.21
SNORD55-201ENST00000581525 DERAQ9Y315 318 aa13.77□□□□□ -0.21
SNORD55-201ENST00000581525 TDRD15B5MCY1 1934 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 LACTBL1A8MY62 500 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 TISP43B9A030 160 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 LINC01565O15544 149 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 CLASP2O75122 1294 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 ZNF202O95125 648 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 LDHAP00338 332 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 CASP1P29466 404 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 CLCNKBP51801 687 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 ELAVL2Q12926 359 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 ZBTB41Q5SVQ8 909 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 KLHL5Q96PQ7 755 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 BLZF1Q9H2G9 400 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SNORD55-201ENST00000581525 CLDND1Q9NY35 253 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 CHMP5Q9NZZ3 219 aa13.76□□□□□ -0.21
SNORD55-201ENST00000581525 UBE4BO95155 1302 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 CASTOR2A6NHX0 329 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 PER2O15055 1255 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 TGFB1I1O43294 461 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 TBX10O75333 385 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 TADA2AO75478 443 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 KIF4AO95239 1232 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 CXCL8P10145 99 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 HOXB8P17481 243 aaPredicted RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 FGFR3P22607 806 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 PAX3P23760 479 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 IGFBP6P24592 240 aaPredicted RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 AFMP43652 599 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 DPYDQ12882 1025 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 SPATA1Q5VX52 437 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 RBM23Q86U06 439 aaKnown RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 PPFIBP1Q86W92 1011 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 NT5DC4Q86YG4 428 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 C12orf56Q8IXR9 622 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 GRAMD1CQ8IYS0 662 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 S1PR5Q9H228 398 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 IGFLR1Q9H665 355 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 RPF1Q9H9Y2 349 aaKnown RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
SNORD55-201ENST00000581525 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
SNORD55-201ENST00000581525 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNORD55-201ENST00000581525 RHOBTB3O94955 611 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 KCNA5P22460 613 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 GLUD2P49448 558 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 AARSP49588 968 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNORD55-201ENST00000581525 STK4Q13043 487 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
SNORD55-201ENST00000581525 KCNB1Q14721 858 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 SMRP1Q8NCR6 262 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
SNORD55-201ENST00000581525 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms