RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CEP72Q9P209 647 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 PCDHB1Q9Y5F3 818 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 FRMPD2Q68DX3 1309 aaPredicted RBP6□□□□□ -1.45
SMCHD1-205ENST00000581383 CAND2O75155 1236 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 KRT18P05783 430 aaKnown RBP6□□□□□ -1.45
SMCHD1-205ENST00000581383 SLC6A9P48067 706 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 PURAQ00577 322 aaKnown RBP6□□□□□ -1.45
SMCHD1-205ENST00000581383 DSC2Q02487 901 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 MST1LQ2TV78 715 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 ZBTB34Q8NCN2 500 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 PPP1R35Q8TAP8 253 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 ZNF480Q8WV37 535 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 HAS1Q92839 578 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 C1GALT1C1Q96EU7 318 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 CRAMP1Q96RY5 1269 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 UHRF1Q96T88 793 aaPredicted RBP6□□□□□ -1.45
SMCHD1-205ENST00000581383 PRRX2Q99811 253 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 LDAHQ9H6V9 325 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 PRDM11Q9NQV5 511 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 HDAC5Q9UQL6 1122 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 SIK3Q9Y2K2 1263 aa6□□□□□ -1.45
SMCHD1-205ENST00000581383 CCDC194A0A1B0GVG4 234 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 ENDOD1O94919 500 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 PEX11BO96011 259 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 ALDH2P05091 517 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 DUSP2Q05923 314 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 FNDC7Q5VTL7 733 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 KSR2Q6VAB6 950 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 DRC7Q8IY82 874 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 CMTM4Q8IZR5 234 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 PQLC1Q8N2U9 271 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 LILRA3Q8N6C8 439 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 FBXO18Q8NFZ0 1043 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 CCHCR1Q8TD31 782 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 SLC25A43Q8WUT9 341 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 PDCD2LQ9BRP1 358 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 BCO1Q9HAY6 547 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 C1orf112Q9NSG2 853 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 TDP1Q9NUW8 608 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 SLC52A1Q9NWF4 448 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 GPRC5DQ9NZD1 345 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 HECAQ9UBI9 543 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 TRPS1Q9UHF7 1281 aa5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 CFAP20Q9Y6A4 193 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-205ENST00000581383 ADCY6O43306 1168 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 ITGA10O75578 1167 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 RECQL4O94761 1208 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 MAP4K4O95819 1239 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 SREBF1P36956 1147 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 CASRP41180 1078 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 WNT3AP56704 352 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 GBX1Q14549 363 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 LLGL1Q15334 1064 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 MAP9Q49MG5 647 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 GJC2Q5T442 439 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 LAIR1Q6GTX8 287 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 PPP4R3AQ6IN85 833 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 CCAR1Q8IX12 1150 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 REPS2Q8NFH8 660 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 OR7D4Q8NG98 312 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 OR5M3Q8NGP4 307 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 ZNF512Q96ME7 567 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 MNTQ99583 582 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 MANSC1Q9H8J5 431 aa5.98□□□□□ -1.45
SMCHD1-205ENST00000581383 LRRC14BA6NHZ5 514 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 RPLP2P05387 115 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 HK1P19367 917 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 PTPN7P35236 360 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 HLTFQ14527 1009 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 PTPAQ15257 358 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 TTC7BQ86TV6 843 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 RSPH3Q86UC2 560 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 DENND1CQ8IV53 801 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 ZNF276Q8N554 614 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 MDM1Q8TC05 714 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 ST8SIA2Q92186 375 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 CLPTM1LQ96KA5 538 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 CPPED1Q9BRF8 314 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 ARNT2Q9HBZ2 717 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 EIF2B4Q9UI10 523 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 SORCS3Q9UPU3 1222 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 XDHP47989 1333 aa5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 MYBBP1AQ9BQG0 1328 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-205ENST00000581383 A6NNZ2 444 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 H3BML4 177 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 NRP1O14786 923 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 MTSS1O43312 755 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 UBXN7O94888 489 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 GASTP01350 101 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 FTLP02792 175 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 MYL1P05976 194 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 GYPEP15421 78 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CRHR1P34998 444 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 MAP2K6P52564 334 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 ADAM8P78325 824 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CDC42EP1Q00587 391 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 TARDBPQ13148 414 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CCDC157Q569K6 752 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms