RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 UCMAQ8WVF2 138 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 DDX1Q92499 740 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 LTV1Q96GA3 475 aaPredicted RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 ZSCAN31Q96LW9 406 aaPredicted RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 EYA3Q99504 573 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 SH3GL3Q99963 347 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 NSRP1Q9H0G5 558 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 SLC12A5Q9H2X9 1139 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 ADAMTS10Q9H324 1103 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 RSAD1Q9HA92 442 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 DDX18Q9NVP1 670 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 HDAC6Q9UBN7 1215 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 PPT2Q9UMR5 302 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 EDARQ9UNE0 448 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 CYP8B1Q9UNU6 501 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 PTPN22Q9Y2R2 807 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 A0A087X0M5 115 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 A0A1B0GX30 115 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CTAGE9A4FU28 777 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 EIF3FO00303 357 aaPredicted RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 EBAG9O00559 213 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 IKBKBO14920 756 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 PLD2O14939 933 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TLR3O15455 904 aaKnown RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 SLITRK3O94933 977 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ADCY5O95622 1261 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CBX7O95931 251 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TBX18O95935 607 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 LTFP02788 710 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CKBP12277 381 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ALOX12P18054 663 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TRHRP34981 398 aaPredicted RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 SOX6P35712 828 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 MSH2P43246 934 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 RECQLP46063 649 aaPredicted RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 YARSP54577 528 aaKnown RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 DCAF7P61962 342 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CCNA1P78396 465 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TMPRSS15P98073 1019 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 GBE1Q04446 702 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CCDC38Q502W7 563 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ATG9AQ7Z3C6 839 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 THAP5Q7Z6K1 395 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CCDC170Q8IYT3 715 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CCDC33Q8N5R6 958 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ESX1Q8N693 406 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 IL17RDQ8NFM7 739 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 OR6C4Q8NGE1 309 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CDKL2Q92772 493 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TNPO1Q92973 898 aaKnown RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 ZPBPQ9BS86 351 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TRIM5Q9C035 493 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 CEP44Q9C0F1 390 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TRIT1Q9H3H1 467 aaKnown RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 DCP1AQ9NPI6 582 aaPredicted RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 WASH6PQ9NQA3 447 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 INCENPQ9NQS7 918 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 PICK1Q9NRD5 415 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 USP40Q9NVE5 1235 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.09□□□□□ -1.27
COPS3-216ENST00000579716 AATFQ9NY61 560 aaKnown RBP eCLIP7.09□□□□□ -1.27
COPS3-216ENST00000579716 TUBA8Q9NY65 449 aaPredicted RBP7.09□□□□□ -1.27
COPS3-216ENST00000579716 SLAMF8Q9P0V8 285 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 ZSWIM5Q9P217 1185 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 TEKT2Q9UIF3 430 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 SLC13A4Q9UKG4 626 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 JAG2Q9Y219 1238 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 PCDHB12Q9Y5F1 795 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 AP1M2Q9Y6Q5 423 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 SLC4A4Q9Y6R1 1079 aa7.09□□□□□ -1.27
COPS3-216ENST00000579716 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 GFRA2O00451 464 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 RIPK2O43353 540 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 NOL3O60936 208 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 GLRX3O76003 335 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 DDAH1O94760 285 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 HPXP02790 462 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TMEM253P0C7T8 217 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SCG2P13521 617 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 HSPA6P17066 643 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 GAP43P17677 238 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 LAG3P18627 525 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 HLA-DPA1P20036 260 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 GLDCP23378 1020 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 GSTT1P30711 240 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 MCM5P33992 734 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 NF2P35240 595 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 CCNFP41002 786 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 MTIF2P46199 727 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 POLD2P49005 469 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 USP14P54578 494 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 NLRP5P59047 1200 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TUBA3CQ13748 450 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SSPNQ14714 243 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms