RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 MLH1P40692 756 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 OR1G1P47890 313 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 DUSP6Q16828 381 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 SPECC1Q5M775 1068 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 THSD4Q6ZMP0 1018 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 USP49Q70CQ1 688 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 DYMQ7RTS9 669 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 USP37Q86T82 979 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 SYCP3Q8IZU3 236 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 VPS52Q8N1B4 723 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 PDILTQ8N807 584 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 TIGD1Q96MW7 591 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 FIZ1Q96SL8 496 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 TCF25Q9BQ70 676 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 TANC1Q9C0D5 1861 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 CDT1Q9H211 546 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 NXF3Q9H4D5 531 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 PLEKHA4Q9H4M7 779 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 ENTPD7Q9NQZ7 604 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 CHST7Q9NS84 486 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 SNTG2Q9NY99 539 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 UBQLN1Q9UMX0 589 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 HPSEQ9Y251 543 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 ZDHHC9Q9Y397 364 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 C2CD2Q9Y426 696 aa9.35□□□□□ -0.91
PPP4R1-210ENST00000578557 RCCD1A6NED2 376 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 H7C4K7 107 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 RFXAPO00287 272 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 SYN3O14994 580 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 RECQL4O94761 1208 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 DDHD2O94830 711 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 GCNT3O95395 438 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 URODP06132 367 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 FAM163BP0C2L3 166 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 LIG1P18858 919 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 AKAP5P24588 427 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 PNPLA4P41247 253 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 SLC11A1P49279 550 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 SCNN1GP51170 649 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 AP3M2P53677 418 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 ASIC1P78348 528 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 DSG1Q02413 1049 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 PPP2R3AQ06190 1150 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 ENPEPQ07075 957 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 SMARCB1Q12824 385 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 COASYQ13057 564 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 CAMK1Q14012 370 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 KCNB1Q14721 858 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 TCEAL5Q5H9L2 206 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 ZNF280BQ86YH2 543 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 GSTCDQ8NEC7 633 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 APPL2Q8NEU8 664 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 LPPQ93052 612 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 DHX58Q96C10 678 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 NECTIN4Q96NY8 510 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 PPP1R10Q96QC0 940 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 MSTO1Q9BUK6 570 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 HERC2P3Q9BVR0 1158 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 PANK2Q9BZ23 570 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 ZBP1Q9H171 429 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 UBE2ZQ9H832 354 aaPredicted RBP9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 RXFP1Q9HBX9 757 aa9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 AGO2Q9UKV8 859 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 R3HCC1Q9Y3T6 440 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-210ENST00000578557 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 C2orf71A6NGG8 1288 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 ABLIM1O14639 778 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 SMC2O95347 1197 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 EFEMP2O95967 443 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 LRPAP1P30533 357 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 GLUD2P49448 558 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 PKP1Q13835 747 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 UPP1Q16831 310 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 BMT2Q1RMZ1 405 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 FAM26FQ5R3K3 315 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 CES5AQ6NT32 575 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 C15orf39Q6ZRI6 1047 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 SFR1Q86XK3 245 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 C12orf56Q8IXR9 622 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 RNF168Q8IYW5 571 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 SPATA18Q8TC71 538 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 POMGNT1Q8WZA1 660 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 SNX27Q96L92 541 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 ZFP42Q96MM3 310 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
PPP4R1-210ENST00000578557 TTPALQ9BTX7 342 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms