RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PDCLQ13371 301 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TARBP2Q15633 366 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DNAJC21Q5F1R6 531 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LIN9Q5TKA1 542 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LMBRD2Q68DH5 695 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PPP1R2P3Q6NXS1 205 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZDHHC24Q6UX98 284 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CRELD2Q6UXH1 353 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SRLQ86TD4 932 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CPNE8Q86YQ8 564 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GPC2Q8N158 579 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZNF526Q8TF50 670 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MAIP1Q8WWC4 291 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SLC7A3Q8WY07 619 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 C18orf8Q96DM3 657 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BTBD6Q96KE9 485 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PCYT2Q99447 389 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MSTO1Q9BUK6 570 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PLVAPQ9BX97 442 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM129AQ9BZQ8 928 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TRIM31Q9BZY9 425 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 HAPLN2Q9GZV7 340 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RBAKQ9NYW8 714 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BTBD7Q9P203 1132 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CHORDC1Q9UHD1 332 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RSPH14Q9UHP6 348 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PCDHB2Q9Y5E7 798 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZNFX1Q9P2E3 1918 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 A0A0B4J269 797 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SOWAHBA6NEL2 793 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FSCN2O14926 492 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FARP2O94887 1054 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CLTAP09496 248 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 POTEJP0CG39 1038 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ACO1P21399 889 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TBXAS1P24557 533 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MAPK4P31152 587 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SLC1A1P43005 524 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ATP1A2P50993 1020 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 AP3M2P53677 418 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 WNT7BP56706 349 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CENPCQ03188 943 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FSTL1Q12841 308 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CUL2Q13617 745 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CAPSQ13938 189 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PRKG1Q13976 671 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 VGLL4Q14135 290 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NEDD9Q14511 834 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SIX1Q15475 284 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TREML2Q5T2D2 321 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TTC27Q6P3X3 843 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZDHHC14Q8IZN3 488 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 OR2W6PQ8NHA6 318 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GLG1Q92896 1179 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ELMO3Q96BJ8 720 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZBTB45Q96K62 511 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM167AQ96KS9 214 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TARS2Q9BW92 718 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM107BQ9H098 131 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TSPYL1Q9H0U9 437 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GRHL1Q9NZI5 618 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MTRF1LQ9UGC7 380 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ANAPC7Q9UJX3 599 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SNX24Q9Y343 169 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PCDHB4Q9Y5E5 795 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PASKQ96RG2 1323 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 OTOFQ9HC10 1997 aa9.99□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PTPRFP10586 1907 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DICER1Q9UPY3 1922 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MYH9P35579 1960 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ADCY3O60266 1144 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZEB2O60315 1214 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MAFO75444 373 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CALCAP01258 141 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NUDT17P0C025 328 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RARAP10276 462 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MDH1P40925 334 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NSFP46459 744 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RPL21P46778 160 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ACOT2P49753 483 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 STAT5BP51692 787 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PMS2P54278 862 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PTP4A2Q12974 167 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GRM1Q13255 1194 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 KRT71Q3SY84 523 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 IER5Q5VY09 327 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SPOPLQ6IQ16 392 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CCDC137Q6PK04 289 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GADL1Q6ZQY3 521 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MON1BQ7L1V2 547 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 HOOK3Q86VS8 718 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BRSK2Q8IWQ3 736 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms