RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 NCDNQ9UBB6 729 aa4.47□□□□□ -1.69
DDX42-205ENST00000577978 CFDP1Q9UEE9 299 aaPredicted RBP4.47□□□□□ -1.69
DDX42-205ENST00000577978 FZD1Q9UP38 647 aa4.47□□□□□ -1.69
DDX42-205ENST00000577978 CCDC7Q96M83 1385 aa4.47□□□□□ -1.69
DDX42-205ENST00000577978 CDC42BPGQ6DT37 1551 aa4.47□□□□□ -1.69
DDX42-205ENST00000577978 SPATA31A3Q5VYP0 1347 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 OVOS2A0A0G2JMS6 1433 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 OVOS2A0A0J9YW53 1432 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 TNS3Q68CZ2 1445 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 OVOS2Q6IE36 1432 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 LMTK2Q8IWU2 1503 aa4.46□□□□□ -1.69
DDX42-205ENST00000577978 TRIM24O15164 1050 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 KPNA6O60684 536 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 FRAT2O75474 233 aaPredicted RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 RECQL4O94761 1208 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 GCP02774 474 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 HNRNPLP14866 589 aaKnown RBP eCLIP4.46□□□□□ -1.7
DDX42-205ENST00000577978 LBX1P52954 281 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 RRP1P56182 461 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 PTPAQ15257 358 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 CCDC184Q52MB2 194 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 GPR158Q5T848 1215 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 UTP14CQ5TAP6 766 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 C1QL3Q5VWW1 255 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 MTERF4Q7Z6M4 381 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 NPM2Q86SE8 214 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 LRRTM3Q86VH5 581 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 SMC1BQ8NDV3 1235 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 PPP1R14CQ8TAE6 165 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 RTF1Q92541 710 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 NINJ1Q92982 152 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 PDCD2LQ9BRP1 358 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 H2AFY2Q9P0M6 372 aaPredicted RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 CD2APQ9Y5K6 639 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 PARP4Q9UKK3 1724 aaKnown RBP4.46□□□□□ -1.7
DDX42-205ENST00000577978 MYOM3Q5VTT5 1437 aa4.46□□□□□ -1.7
DDX42-205ENST00000577978 KTN1Q86UP2 1357 aaKnown RBP4.45□□□□□ -1.7
DDX42-205ENST00000577978 KIF15Q9NS87 1388 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 A0A0A6YYK5 440 aaPredicted RBP4.45□□□□□ -1.7
DDX42-205ENST00000577978 APOL3O95236 402 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 ABHD16AO95870 558 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 ITGB1P05556 798 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 NEK4P51957 841 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 COL10A1Q03692 680 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 TAF7LQ5H9L4 462 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 DPY19L2P1Q6NXN4 242 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 UNQ6494/PRO21346Q6UXR6 183 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 LRRC55Q6ZSA7 311 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 UNC5BQ8IZJ1 945 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 SLC17A8Q8NDX2 589 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.45□□□□□ -1.7
DDX42-205ENST00000577978 APPBP2Q92624 585 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 PGBD4Q96DM1 585 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 NOL10Q9BSC4 688 aaKnown RBP4.45□□□□□ -1.7
DDX42-205ENST00000577978 SOX7Q9BT81 388 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 HFM1A2PYH4 1435 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
DDX42-205ENST00000577978 PKD1L3Q7Z443 1732 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 PLEKHG2Q9H7P9 1386 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 ZNF891A8MT65 544 aaPredicted RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 HSPA5P11021 654 aaKnown RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 HSPA8P11142 646 aaKnown RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 XRCC6P12956 609 aaKnown RBP eCLIP4.44□□□□□ -1.7
DDX42-205ENST00000577978 GYPEP15421 78 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 BMP5P22003 454 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 ADRA1BP35368 520 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 KPNA1P52294 538 aaPredicted RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 WNT3AP56704 352 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 PHC1P78364 1004 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 OCRLQ01968 901 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 TKFCQ3LXA3 575 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 IQSEC1Q6DN90 963 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 KCNV1Q6PIU1 500 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 ESPNLQ6ZVH7 1005 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 NIM1KQ8IY84 436 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 NXPE1Q8N323 547 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 PPM1KQ8N3J5 372 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 GLB1L3Q8NCI6 653 aaPredicted RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 PROKR1Q8TCW9 393 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 CHTF18Q8WVB6 975 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 FAM193BQ96PV7 902 aaPredicted RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 FANCLQ9NW38 375 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 THG1LQ9NWX6 298 aaKnown RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 PACSIN3Q9UKS6 424 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 PLAAQ9Y263 795 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 PCDHB6Q9Y5E3 794 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 TECPR2O15040 1411 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 SPATA31E1Q6ZUB1 1445 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 VIRMAQ69YN4 1812 aaKnown RBP4.44□□□□□ -1.7
DDX42-205ENST00000577978 SPATA31A1Q5TZJ5 1347 aa4.44□□□□□ -1.7
DDX42-205ENST00000577978 ATP7BP35670 1465 aa4.43□□□□□ -1.7
DDX42-205ENST00000577978 SZT2Q5T011 3432 aa4.43□□□□□ -1.7
DDX42-205ENST00000577978 ARHGEF10O15013 1369 aa4.43□□□□□ -1.7
DDX42-205ENST00000577978 A0A0U1RQG5 324 aaPredicted RBP4.43□□□□□ -1.7
DDX42-205ENST00000577978 GOLGA6L3A6NEY3 463 aa4.43□□□□□ -1.7
DDX42-205ENST00000577978 ELL2O00472 640 aaPredicted RBP4.43□□□□□ -1.7
DDX42-205ENST00000577978 HOXA3O43365 443 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms