RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NT5DC3Q86UY8 548 aa18.93■□□□□ 0.62
ATPAF1-214ENST00000576409 AGO2Q9UKV8 859 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-214ENST00000576409 UBE4BO95155 1302 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 TRAPPC3O43617 180 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 PSAPP07602 524 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 RRM1P23921 792 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 NT5C2P49902 561 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 ITKQ08881 620 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 TMED1Q13445 227 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 FAXCQ5TGI0 409 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 SPOPLQ6IQ16 392 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 KIF9Q9HAQ2 790 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 VCX3AQ9NNX9 186 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 RARGP13631 454 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 KLC1Q07866 573 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 QPCTQ16769 361 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 Q3C1V9 767 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 ATG16L1Q676U5 607 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 UVRAGQ9P2Y5 699 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 B2RBV5 119 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 GGPS1O95749 300 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 ARP10275 920 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 NR1H3Q13133 447 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 IQCKQ8N0W5 287 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 TTC25Q96NG3 672 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 ACAP3Q96P50 834 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 TSSK1BQ9BXA7 367 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 MIS12Q9H081 205 aa18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 APOBEC2Q9Y235 224 aaKnown RBP18.92■□□□□ 0.62
ATPAF1-214ENST00000576409 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 CNGA1P29973 690 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 MARCKSL1P49006 195 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ZNF699Q32M78 642 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 KCNT1Q5JUK3 1230 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 EP400NLQ6ZTU2 488 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 TRIM42Q8IWZ5 723 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 DNAJC9Q8WXX5 260 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 AGBL1Q96MI9 1066 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 PWWP2AQ96N64 755 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 POLR3FQ9H1D9 316 aaPredicted RBP18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 SSX2IPQ9Y2D8 614 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ECE2O60344 883 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ATP6V1G2O95670 118 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 WEE2P0C1S8 567 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 PPP4CP60510 307 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ITGB3BPQ13352 177 aaPredicted RBP18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 GADL1Q6ZQY3 521 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 MMTAG2Q9BU76 263 aaKnown RBP18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 GIPC1O14908 333 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 GMNNO75496 209 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ASNSP08243 561 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 SOX10P56693 466 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 SNX16P57768 344 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 PSMC5P62195 406 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 SEPT6Q14141 434 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 MIS18BP1Q6P0N0 1132 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 APTXQ7Z2E3 356 aaKnown RBP18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 FAM160B2Q86V87 743 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 SLC38A10Q9HBR0 1119 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 TUFT1Q9NNX1 390 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 NDE1Q9NXR1 346 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 PHTF1Q9UMS5 762 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
ATPAF1-214ENST00000576409 KIF1CO43896 1103 aaKnown RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 ZCCHC18P0CG32 403 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 LRRC23Q53EV4 343 aaPredicted RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 FAM102AQ5T9C2 384 aaPredicted RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 RAB6BQ9NRW1 208 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 PJA2O43164 708 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 HSPA4LO95757 839 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 PTENP60484 403 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 GPD1LQ8N335 351 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 TUBB6Q9BUF5 446 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 RNF146Q9NTX7 359 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 GEMIN8Q9NWZ8 242 aaKnown RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 H3BRJ5 948 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 CST8O60676 142 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 BCAR1P56945 870 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 SESN2P58004 480 aaPredicted RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 EIF3EP60228 445 aaKnown RBP18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 PODNQ7Z5L7 613 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 TAS1R2Q8TE23 839 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 Q9H521 79 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 PCDHGC5Q9Y5F6 944 aa18.9■□□□□ 0.62
ATPAF1-214ENST00000576409 KRT38O76015 456 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 ART3Q13508 389 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 PLCB4Q15147 1175 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 WDR72Q3MJ13 1102 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 CBWD6Q4V339 395 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 CBWD3Q5JTY5 395 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms