RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CXCL8P10145 99 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 MYBP10242 640 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 RBM10P98175 930 aaKnown RBP25.61■■□□□ 1.69
SNF8-217ENST00000576353 CLUL1Q15846 466 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 KIAA0319Q5VV43 1072 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 SYCP3Q8IZU3 236 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 KLHL5Q96PQ7 755 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 UHRF1Q96T88 793 aaPredicted RBP25.61■■□□□ 1.69
SNF8-217ENST00000576353 TMEM206Q9H813 350 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 RPF1Q9H9Y2 349 aaKnown RBP25.61■■□□□ 1.69
SNF8-217ENST00000576353 HCFC2Q9Y5Z7 792 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 XIRP2A4UGR9 3374 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 A0A1W2PQ27 194 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 A0A1W2PQ64 194 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 A0A1W2PQD8 194 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 TTC26A0AVF1 554 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 TMEM189-UBE2V1I3L0A0 370 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 MEFVO15553 781 aaPredicted RBP25.6■■□□□ 1.69
SNF8-217ENST00000576353 FAM189A1O60320 539 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 CNPP09543 421 aaKnown RBP25.6■■□□□ 1.69
SNF8-217ENST00000576353 KLRC2P26717 231 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 RPL9P32969 192 aaKnown RBP25.6■■□□□ 1.69
SNF8-217ENST00000576353 CLCNKBP51801 687 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 CASP5P51878 434 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 PPP2R3AQ06190 1150 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 SMAD4Q13485 552 aaKnown RBP25.6■■□□□ 1.69
SNF8-217ENST00000576353 UPP1Q16831 310 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 CD302Q8IX05 232 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 HASPINQ8TF76 798 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 TSPAN18Q96SJ8 248 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 SERTAD1Q9UHV2 236 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 HPSEQ9Y251 543 aa25.6■■□□□ 1.69
SNF8-217ENST00000576353 HOXB8P17481 243 aaPredicted RBP25.59■■□□□ 1.69
SNF8-217ENST00000576353 TNFSF9P41273 254 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 AFMP43652 599 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 KCNA1Q09470 495 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 ANKRD54Q6NXT1 300 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 UNC13DQ70J99 1090 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 SMRP1Q8NCR6 262 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 POMGNT1Q8WZA1 660 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 GOLGA2P5Q9HBQ8 144 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 RXFP1Q9HBX9 757 aa25.59■■□□□ 1.69
SNF8-217ENST00000576353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.59■■□□□ 1.69
SNF8-217ENST00000576353 CPSF3Q9UKF6 684 aaKnown RBP25.59■■□□□ 1.69
SNF8-217ENST00000576353 AGO2Q9UKV8 859 aaKnown RBP25.59■■□□□ 1.69
SNF8-217ENST00000576353 SPTBN5Q9NRC6 3674 aaKnown RBP25.59■■□□□ 1.69
SNF8-217ENST00000576353 FAM237AA0A1B0GTK4 181 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 PVALEFA0A1B0GWK0 134 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 TISP43B9A030 160 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 MBTPS2O43462 519 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 TRAPPC3O43617 180 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 ACTN4O43707 911 aaKnown RBP25.58■■□□□ 1.69
SNF8-217ENST00000576353 ADRB2P07550 413 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 IL9P15248 144 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 SYKP43405 635 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 POU5F1Q01860 360 aaKnown RBP25.58■■□□□ 1.69
SNF8-217ENST00000576353 CREMQ03060 361 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 SOX4Q06945 474 aaPredicted RBP25.58■■□□□ 1.69
SNF8-217ENST00000576353 ENOX2Q16206 610 aaKnown RBP25.58■■□□□ 1.69
SNF8-217ENST00000576353 ZBTB41Q5SVQ8 909 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 FAM171A1Q5VUB5 890 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 SLC22A17Q8WUG5 538 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 RIN2Q8WYP3 895 aaPredicted RBP25.58■■□□□ 1.69
SNF8-217ENST00000576353 TTPALQ9BTX7 342 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 FGFBP2Q9BYJ0 223 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 BLZF1Q9H2G9 400 aa25.58■■□□□ 1.69
SNF8-217ENST00000576353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.57■■□□□ 1.68
SNF8-217ENST00000576353 LACTBL1A8MY62 500 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 PODXLO00592 558 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 PRPF6O94906 941 aaKnown RBP25.57■■□□□ 1.68
SNF8-217ENST00000576353 ADH1AP07327 375 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 TPRNQ4KMQ1 711 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 FAM26FQ5R3K3 315 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 C18orf25Q96B23 403 aaPredicted RBP25.57■■□□□ 1.68
SNF8-217ENST00000576353 KIF12Q96FN5 646 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 PAGE5Q96GU1 130 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 B3GALT6Q96L58 329 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 GDPD2Q9HCC8 539 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 DZANK1Q9NVP4 752 aa25.57■■□□□ 1.68
SNF8-217ENST00000576353 TEX28O15482 410 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 XPOTO43592 962 aaKnown RBP25.56■■□□□ 1.68
SNF8-217ENST00000576353 ADSSP30520 456 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 ACOT2P49753 483 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 NDUFA8P51970 172 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 CUL4BQ13620 913 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 SMAD2Q15796 467 aaKnown RBP25.56■■□□□ 1.68
SNF8-217ENST00000576353 PDXDC1Q6P996 788 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 CEP57Q86XR8 500 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 FSIP1Q8NA03 581 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 HPS3Q969F9 1004 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 IKZF4Q9H2S9 585 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 FNIP2Q9P278 1114 aa25.56■■□□□ 1.68
SNF8-217ENST00000576353 UBQLN1Q9UMX0 589 aaKnown RBP25.56■■□□□ 1.68
SNF8-217ENST00000576353 EIF3DO15371 548 aaKnown RBP eCLIP25.55■■□□□ 1.68
SNF8-217ENST00000576353 LDHAP00338 332 aaKnown RBP25.55■■□□□ 1.68
SNF8-217ENST00000576353 MYL1P05976 194 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 EPCAMP16422 314 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 CYP3A5P20815 502 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 GARTP22102 1010 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 CASP1P29466 404 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms