RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 USP25Q9UHP3 1055 aa11.59□□□□□ -0.55
LITAF-216ENST00000574848 FBXO2Q9UK22 296 aaPredicted RBP11.59□□□□□ -0.55
LITAF-216ENST00000574848 KCNH3Q9ULD8 1083 aa11.59□□□□□ -0.55
LITAF-216ENST00000574848 ODF2LQ9ULJ1 636 aa11.59□□□□□ -0.55
LITAF-216ENST00000574848 USP20Q9Y2K6 914 aa11.59□□□□□ -0.55
LITAF-216ENST00000574848 TRIOO75962 3097 aa11.59□□□□□ -0.55
LITAF-216ENST00000574848 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 TEX28O15482 410 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 KIF4AO95239 1232 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
LITAF-216ENST00000574848 MAPTP10636 758 aaKnown RBP11.58□□□□□ -0.56
LITAF-216ENST00000574848 MCF2P10911 925 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 TXLNAP40222 546 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 ZNF131P52739 623 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 NCKAP1LP55160 1127 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 TPM4P67936 248 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 USP41Q3LFD5 358 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 ZNF568Q3ZCX4 644 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 ANO6Q4KMQ2 910 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 ARSHQ5FYA8 562 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 C15orf39Q6ZRI6 1047 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 TMEM161BQ8NDZ6 487 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 HDAC7Q8WUI4 952 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 EDAQ92838 391 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 PAAF1Q9BRP4 392 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 CXCL16Q9H2A7 254 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 BLOC1S4Q9NUP1 217 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 CDH22Q9UJ99 828 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 NR2E1Q9Y466 385 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 CITO14578 2027 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.56
LITAF-216ENST00000574848 TECTAO75443 2155 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 TRIP11Q15643 1979 aa11.58□□□□□ -0.56
LITAF-216ENST00000574848 CASTOR2A6NHX0 329 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 H0YCG3 227 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 SLC16A4O15374 487 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 GLUD1P00367 558 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 KLRC2P26717 231 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 UBA7P41226 1012 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 ZNF165P49910 485 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 GRIN1Q05586 938 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 ELAVL2Q12926 359 aaKnown RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 PTPN21Q16825 1174 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 RARS2Q5T160 578 aaKnown RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 SHC4Q6S5L8 630 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 ALKAL1Q6UXT8 129 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 CYP26C1Q6V0L0 522 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 ZPBP2Q6X784 338 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 GPR149Q86SP6 731 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 CEP120Q8N960 986 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 PIK3R5Q8WYR1 880 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 SNX27Q96L92 541 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 UROC1Q96N76 676 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 CCDC94Q9BW85 323 aaPredicted RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 TARS2Q9BW92 718 aaKnown RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 APOL5Q9BWW9 433 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 CCSER1Q9C0I3 900 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 MAN1C1Q9NR34 630 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 TOPORSQ9NS56 1045 aaPredicted RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 KIAA1468Q9P260 1216 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 LARSQ9P2J5 1176 aaKnown RBP11.57□□□□□ -0.56
LITAF-216ENST00000574848 CACNG4Q9UBN1 327 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 DPP7Q9UHL4 492 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 GDAQ9Y2T3 454 aa11.57□□□□□ -0.56
LITAF-216ENST00000574848 ZNF318Q5VUA4 2279 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 BECN2A8MW95 431 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 C2CD2LO14523 706 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 TADA2AO75478 443 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 TOM1L1O75674 476 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 PIGRP01833 764 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 KCNE1P15382 129 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 PLCG1P19174 1290 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 SMTNP53814 917 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 ZXDAP98168 799 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 NOLC1Q14978 699 aaKnown RBP eCLIP11.56□□□□□ -0.561e-6■□□□□ 11
LITAF-216ENST00000574848 RTP2Q5QGT7 225 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 ATAT1Q5SQI0 421 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 LILRA6Q6PI73 481 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 ELMSAN1Q6PJG2 1045 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 ZDHHC14Q8IZN3 488 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 C12orf76Q8N812 135 aaPredicted RBP11.56□□□□□ -0.56
LITAF-216ENST00000574848 RAD54LQ92698 747 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 PLIN2Q99541 437 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 CNTN3Q9P232 1028 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 HCN4Q9Y3Q4 1203 aa11.56□□□□□ -0.56
LITAF-216ENST00000574848 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
LITAF-216ENST00000574848 SMIM28A0A1B0GU29 152 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms