RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CDY1Q9Y6F8 540 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 MIA3Q5JRA6 1907 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 LAD1O00515 517 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 LRG1P02750 347 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
CCDC40-210ENST00000573903 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
CCDC40-210ENST00000573903 ELF1P32519 619 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 GRM5P41594 1212 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 PEX3P56589 373 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 FOXK2Q01167 660 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 PFKPQ01813 784 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 PDIA5Q14554 519 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
CCDC40-210ENST00000573903 PJA1Q8NG27 643 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 FGF14Q92915 247 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
CCDC40-210ENST00000573903 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 POLD4Q9HCU8 107 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 KIF3AQ9Y496 699 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
CCDC40-210ENST00000573903 CITO14578 2027 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 PRRG1O14668 218 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 ADAM12O43184 909 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 HIP1RO75146 1068 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 LMNAP02545 664 aaKnown RBP13.36□□□□□ -0.27
CCDC40-210ENST00000573903 NPTX2P47972 431 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 OSTNP61366 133 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 PRKCQQ04759 706 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 PTGDRQ13258 359 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 NBR1Q14596 966 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 ECM1Q16610 540 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 UPP1Q16831 310 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 CDT1Q9H211 546 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 C17orf75Q9HAS0 396 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 GOLGA2P5Q9HBQ8 144 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
CCDC40-210ENST00000573903 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
CCDC40-210ENST00000573903 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
CCDC40-210ENST00000573903 DOCK6Q96HP0 2047 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 H7C4K7 107 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 I3L4J1 428 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 PODXLO00592 558 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 MCF2P10911 925 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 BRCC3P46736 316 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 STARD6P59095 220 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 GPC5P78333 572 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 STRN3Q13033 797 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 MLF2Q15773 248 aaPredicted RBP13.35□□□□□ -0.27
CCDC40-210ENST00000573903 DTHD1Q6ZMT9 781 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 C1orf210Q8IVY1 113 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 CEP120Q8N960 986 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 ACO2Q99798 780 aaKnown RBP13.35□□□□□ -0.27
CCDC40-210ENST00000573903 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 KXD1Q9BQD3 176 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 TIPINQ9BVW5 301 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 BCO2Q9BYV7 579 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 DNMT3BQ9UBC3 853 aaKnown RBP13.35□□□□□ -0.27
CCDC40-210ENST00000573903 KCNG1Q9UIX4 513 aa13.35□□□□□ -0.27
CCDC40-210ENST00000573903 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 MYH11P35749 1972 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 E9PMD0 336 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 SYN3O14994 580 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 RHOP08100 348 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 HARSP12081 509 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 PRPHP41219 470 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ID4P47928 161 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 SMTNP53814 917 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ARPP19P56211 112 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ROR1Q01973 937 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 UBXN2BQ14CS0 331 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 MPZL3Q6UWV2 235 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 C3orf58Q8NDZ4 430 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 RPP25Q9BUL9 199 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 TARS2Q9BW92 718 aaKnown RBP13.34□□□□□ -0.27
CCDC40-210ENST00000573903 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 ARHGAP28Q9P2N2 729 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms