RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	PDC	P20941	246 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	ELAVL2	Q12926	359 aa	Known RBP	18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	PSMD5	Q16401	504 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	SLC10A6	Q3KNW5	377 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	SPECC1	Q5M775	1068 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	CYP26C1	Q6V0L0	522 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	ZPBP2	Q6X784	338 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	OTOP3	Q7RTS5	596 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	HAUS6	Q7Z4H7	955 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	SMG7	Q92540	1137 aa	Known RBP	18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	RAD54L	Q92698	747 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	KCNN1	Q92952	543 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	EPSTI1	Q96J88	318 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	UROC1	Q96N76	676 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	WDR6	Q9NNW5	1121 aa	Known RBP	18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	LARS	Q9P2J5	1176 aa	Known RBP	18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	ODF2L	Q9ULJ1	636 aa		18.34	■□□□□ 0.53
RPS15A-209	ENST00000573554	ZMYND10	O75800	440 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	PDGFB	P01127	241 aa	Predicted RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	BRCC3	P46736	316 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	MCL1	Q07820	350 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	MTMR3	Q13615	1198 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	IER5L	Q5T953	404 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	ELMSAN1	Q6PJG2	1045 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	FBXL6	Q8N531	539 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	C18orf25	Q96B23	403 aa	Predicted RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	ACSF2	Q96CM8	615 aa	Predicted RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	INTS4	Q96HW7	963 aa	Known RBP	18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	PRKD2	Q9BZL6	878 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	CCSER1	Q9C0I3	900 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	FOXD4L1	Q9NU39	408 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	ZDHHC7	Q9NXF8	308 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	CNTN3	Q9P232	1028 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	ANKFY1	Q9P2R3	1169 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	FBXW11	Q9UKB1	542 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	DOCK6	Q96HP0	2047 aa		18.33	■□□□□ 0.52
RPS15A-209	ENST00000573554	MUC6	Q6W4X9	2439 aa		18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	TKT	P29401	623 aa	Known RBP	18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	MARCKS	P29966	332 aa	Predicted RBP	18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	ZNF131	P52739	623 aa		18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	UBALD2	Q8IYN6	164 aa		18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	DDX27	Q96GQ7	796 aa	Known RBP	18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	FIZ1	Q96SL8	496 aa		18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	FBXO2	Q9UK22	296 aa	Predicted RBP	18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	MTMR6	Q9Y217	621 aa		18.32	■□□□□ 0.52
RPS15A-209	ENST00000573554	PDCD11	Q14690	1871 aa	Known RBP	18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	CLUH	O75153	1309 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	PODXL	O00592	558 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	CLDN3	O15551	220 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	OR1D2	P34982	312 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	DDIT3	P35638	169 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	RAB33A	Q14088	237 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	PDXDC1	Q6P996	788 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	TMEM130	Q8N3G9	435 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	MYCT1	Q8N699	235 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	MYADM	Q96S97	322 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	KCNH6	Q9H252	994 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	KCNK12	Q9HB15	430 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	PIDD1	Q9HB75	910 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	SLC38A7	Q9NVC3	462 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	MTRR	Q9UBK8	725 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	TBX20	Q9UMR3	447 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	SRPRB	Q9Y5M8	271 aa	Known RBP	18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	KMT2E	Q8IZD2	1858 aa		18.31	■□□□□ 0.52
RPS15A-209	ENST00000573554	DOCK8	Q8NF50	2099 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554		H0YCG3	227 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554		K7ELQ4	463 aa	Predicted RBP	18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	TRAK2	O60296	914 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	FAM13A	O94988	1023 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	TNFSF9	P41273	254 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	VCP	P55072	806 aa	Known RBP	18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	CEBPZ	Q03701	1054 aa	Known RBP	18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	SUGP1	Q8IWZ8	645 aa	Known RBP	18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	RASSF8	Q8NHQ8	419 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	LARP4B	Q92615	738 aa	Known RBP	18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	CLIC6	Q96NY7	704 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	PARVG	Q9HBI0	331 aa		18.3	■□□□□ 0.52
RPS15A-209	ENST00000573554	ZDBF2	Q9HCK1	2354 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	TRAPPC3	O43617	180 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	FAM189A1	O60320	539 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	PIGR	P01833	764 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	CXCL8	P10145	99 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	GBP2	P32456	591 aa	Predicted RBP	18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	RPL9	P32969	192 aa	Known RBP	18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	SPAG1	Q07617	926 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	ZBTB41	Q5SVQ8	909 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	RSAD2	Q8WXG1	361 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	BICD1	Q96G01	975 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	USP28	Q96RU2	1077 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	ZHX3	Q9H4I2	956 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	BACE2	Q9Y5Z0	518 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	CDY1	Q9Y6F8	540 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	WDFY4	Q6ZS81	3184 aa		18.29	■□□□□ 0.52
RPS15A-209	ENST00000573554	TTC26	A0AVF1	554 aa		18.28	■□□□□ 0.52
RPS15A-209	ENST00000573554		K7ENM7	598 aa		18.28	■□□□□ 0.52
RPS15A-209	ENST00000573554	KRT18	P05783	430 aa	Known RBP	18.28	■□□□□ 0.52
RPS15A-209	ENST00000573554	C8A	P07357	584 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms