RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 GALTP07902 379 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 ATP2B1P20020 1258 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 YWHABP31946 246 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 POLGP54098 1239 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 CAPSQ13938 189 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 XKR9Q5GH70 373 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 NOMO2Q5JPE7 1267 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 ODR4Q5SWX8 454 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 ZNF410Q86VK4 478 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 TPH2Q8IWU9 490 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 RNF149Q8NC42 400 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 PIGOQ8TEQ8 1089 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 PPP2R3CQ969Q6 453 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 ASIC4Q96FT7 647 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 POP1Q99575 1024 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 EIF2AK1Q9BQI3 630 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 APOL6Q9BWW8 343 aa10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 NXF3Q9H4D5 531 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 PRG3Q9Y2Y8 225 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 GPC6Q9Y625 555 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-210ENST00000572824 C2CD2LO14523 706 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 SLITRK3O94933 977 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 CXCL14O95715 111 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 ABL1P00519 1130 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 IGFBP6P24592 240 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 PPM1AP35813 382 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 KRT2P35908 639 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 MLH1P40692 756 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 MBTD1Q05BQ5 628 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 TCF15Q12870 199 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 EPHA7Q15375 998 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 PTPN14Q15678 1187 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 PPP4R3AQ6IN85 833 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 TMEM184AQ6ZMB5 413 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 FERMT3Q86UX7 667 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 DIS3L2Q8IYB7 885 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 MRPL43Q8N983 215 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 SLC22A17Q8WUG5 538 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 TMEM169Q96HH4 297 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 C22orf23Q9BZE7 217 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 EGFL7Q9UHF1 273 aa10.28□□□□□ -0.76
NPLOC4-210ENST00000572824 TNFRSF10BO14763 440 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 EPB41L2O43491 1005 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 MED24O75448 989 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 EOMESO95936 686 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 P4HBP07237 508 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 GLRA2P23416 452 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 SCNN1GP51170 649 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 PTPN21Q16825 1174 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 C11orf91Q3C1V1 193 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 GALNT17Q6IS24 598 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 CPLX2Q6PUV4 134 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 GLB1LQ6UWU2 654 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 TMC5Q6UXY8 1006 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 TMEM130Q8N3G9 435 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 PSPC1Q8WXF1 523 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 GAD1Q99259 594 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 CDCA3Q99618 268 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 PAAF1Q9BRP4 392 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 POLR3FQ9H1D9 316 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 RUBCNLQ9H714 662 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 RSAD1Q9HA92 442 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 CHST12Q9NRB3 414 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 KLK14Q9P0G3 267 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 IPPQ9Y573 584 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 NOTCH4Q99466 2003 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 VPS13AQ96RL7 3174 aa10.27□□□□□ -0.77
NPLOC4-210ENST00000572824 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 N4BP1O75113 896 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 CDKL5O76039 1030 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 CNPP09543 421 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 SPATA31D3P0C874 917 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 SPATA31C1P0DKV0 1188 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 CTSAP10619 480 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 GCFC2P16383 781 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 ARF4P18085 180 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 AKAP5P24588 427 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 TXKP42681 527 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 ALDH7A1P49419 539 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 MRE11P49959 708 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 DNM2P50570 870 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 KRT17Q04695 432 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 CALCRLQ16602 461 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 ECM1Q16610 540 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 RIPOR1Q6ZS17 1223 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 SPATA31D4Q6ZUB0 917 aa10.26□□□□□ -0.77
NPLOC4-210ENST00000572824 MRPL10Q7Z7H8 261 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms