RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ZNF568Q3ZCX4 644 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 ARL6IP4Q66PJ3 421 aaKnown RBP19.86■□□□□ 0.77
CHD3-214ENST00000572579 POTEHQ6S545 545 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.86■□□□□ 0.77
CHD3-214ENST00000572579 SLC44A3Q8N4M1 653 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 SNX27Q96L92 541 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 C17orf75Q9HAS0 396 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 MTRRQ9UBK8 725 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 DPP7Q9UHL4 492 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 KIF3AQ9Y496 699 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 MCF2P10911 925 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 LAMP2P13473 410 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 CREMQ03060 361 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 LARP1BQ659C4 914 aaKnown RBP19.85■□□□□ 0.77
CHD3-214ENST00000572579 MPZL3Q6UWV2 235 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 GRASPQ7Z6J2 395 aaPredicted RBP19.85■□□□□ 0.77
CHD3-214ENST00000572579 DDX27Q96GQ7 796 aaKnown RBP19.85■□□□□ 0.77
CHD3-214ENST00000572579 PIDD1Q9HB75 910 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 BLOC1S4Q9NUP1 217 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 CNTN3Q9P232 1028 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 SMC3Q9UQE7 1217 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 KMT2EQ8IZD2 1858 aa19.85■□□□□ 0.77
CHD3-214ENST00000572579 ANHXE9PGG2 379 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 H0Y858 1186 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 TBC1D4O60343 1298 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 ELAVL2Q12926 359 aaKnown RBP19.84■□□□□ 0.77
CHD3-214ENST00000572579 ASTLQ6HA08 431 aaPredicted RBP19.84■□□□□ 0.77
CHD3-214ENST00000572579 ACAP3Q96P50 834 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 TIPINQ9BVW5 301 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
CHD3-214ENST00000572579 IGSF9Q9P2J2 1179 aa19.84■□□□□ 0.77
CHD3-214ENST00000572579 DOCK6Q96HP0 2047 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 KRBA1A5PL33 1030 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 PODXLO00592 558 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 CCL16O15467 120 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 GALR2O43603 387 aaPredicted RBP19.83■□□□□ 0.77
CHD3-214ENST00000572579 TOM1L1O75674 476 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 C8AP07357 584 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 HARSP12081 509 aaKnown RBP19.83■□□□□ 0.77
CHD3-214ENST00000572579 MCM2P49736 904 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 CUL4AQ13619 759 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 GET4Q7L5D6 327 aaPredicted RBP19.83■□□□□ 0.77
CHD3-214ENST00000572579 ITFG1Q8TB96 612 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 STAMQ92783 540 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 UROC1Q96N76 676 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 PRRX2Q99811 253 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 TCHPQ9BT92 498 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 HCFC1R1Q9NWW0 138 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 BACE2Q9Y5Z0 518 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 CDY1Q9Y6F8 540 aa19.83■□□□□ 0.77
CHD3-214ENST00000572579 VPS13AQ96RL7 3174 aa19.83■□□□□ 0.76
CHD3-214ENST00000572579 VWA8A3KMH1 1905 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 CLCN5P51795 746 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 YARSP54577 528 aaKnown RBP19.82■□□□□ 0.76
CHD3-214ENST00000572579 MCL1Q07820 350 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 HTR4Q13639 388 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 MRPL58Q14197 206 aaKnown RBP19.82■□□□□ 0.76
CHD3-214ENST00000572579 ZBTB41Q5SVQ8 909 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 AXDND1Q5T1B0 1012 aaPredicted RBP19.82■□□□□ 0.76
CHD3-214ENST00000572579 ELMSAN1Q6PJG2 1045 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 USP49Q70CQ1 688 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 KCTD17Q8N5Z5 321 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 SLC7A14Q8TBB6 771 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 KCNN1Q92952 543 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 FIZ1Q96SL8 496 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 REEP2Q9BRK0 252 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHD3-214ENST00000572579 DNMT3BQ9UBC3 853 aaKnown RBP19.82■□□□□ 0.76
CHD3-214ENST00000572579 DOCK8Q8NF50 2099 aa19.82■□□□□ 0.76
CHD3-214ENST00000572579 ZFHX2Q9C0A1 2572 aaPredicted RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 NRG2O14511 850 aaPredicted RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 FAM189A1O60320 539 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 CFHP08603 1231 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 HNRNPA1P09651 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
CHD3-214ENST00000572579 FSHRP23945 695 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 HOXA9P31269 272 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 NCKAP1LP55160 1127 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 SPAG1Q07617 926 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 MCM6Q14566 821 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 KARSQ15046 597 aaKnown RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 SF3A1Q15459 793 aaKnown RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 PPM1LQ5SGD2 360 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 PARM1Q6UWI2 310 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 APBB1IPQ7Z5R6 666 aaPredicted RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 SIX5Q8N196 739 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 FLCNQ8NFG4 579 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 AK8Q96MA6 479 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 TOPORSQ9NS56 1045 aaPredicted RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 ANKFY1Q9P2R3 1169 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
CHD3-214ENST00000572579 TUBGCP4Q9UGJ1 667 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 NUMBLQ9Y6R0 609 aa19.81■□□□□ 0.76
CHD3-214ENST00000572579 ABLIM3O94929 683 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 PLCG1P19174 1290 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 TNFSF9P41273 254 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 ZNF131P52739 623 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
CHD3-214ENST00000572579 NOLC1Q14978 699 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHD3-214ENST00000572579 PTPAQ15257 358 aa19.8■□□□□ 0.76
CHD3-214ENST00000572579 ZBTB6Q15916 424 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms