RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 C4orf19Q8IY42 314 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 FAM177A1Q8N128 213 aaPredicted RBP11.26□□□□□ -0.61
CHMP6-203ENST00000572525 SYNPOQ8N3V7 929 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 ETNPPLQ8TBG4 499 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 E2F7Q96AV8 911 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 ASB16Q96NS5 453 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 SH2D3AQ9BRG2 576 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
CHMP6-203ENST00000572525 SH3GLB2Q9NR46 395 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 BRPF3Q9ULD4 1205 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 WASF3Q9UPY6 502 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PIAS3Q9Y6X2 628 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 MAST4O15021 2626 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 THADAQ6YHU6 1953 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 ARNTLO00327 626 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 KIF4AO95239 1232 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 P4HBP07237 508 aaKnown RBP11.25□□□□□ -0.61
CHMP6-203ENST00000572525 CEBPBP17676 345 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 ARF4P18085 180 aaPredicted RBP11.25□□□□□ -0.61
CHMP6-203ENST00000572525 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
CHMP6-203ENST00000572525 PPP2R5CQ13362 524 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 TFDP1Q14186 410 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 EMC2Q15006 297 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 SLC5A9Q2M3M2 681 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 CEP68Q76N32 757 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
CHMP6-203ENST00000572525 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 ING5Q8WYH8 240 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 MCRS1Q96EZ8 462 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 CEP170P1Q96L14 293 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
CHMP6-203ENST00000572525 HES2Q9Y543 173 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 BPTFQ12830 3046 aa11.25□□□□□ -0.61
CHMP6-203ENST00000572525 A0A1B0GUA9 196 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 C1QTNF9BB2RNN3 333 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 ADAM12O43184 909 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 C1QTNF9P0C862 333 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 KCNA4P22459 653 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 OR1D2P34982 312 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 NPEPPSP55786 919 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 MBTD1Q05BQ5 628 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 POTEHQ6S545 545 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 VITQ6UXI7 678 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 GAB3Q8WWW8 586 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 COL26A1Q96A83 441 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 ZC3H10Q96K80 434 aaKnown RBP11.24□□□□□ -0.61
CHMP6-203ENST00000572525 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 MTRQ99707 1265 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 APOL6Q9BWW8 343 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
CHMP6-203ENST00000572525 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 GPR88Q9GZN0 384 aa11.24□□□□□ -0.61
CHMP6-203ENST00000572525 ABCA7Q8IZY2 2146 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 CACNA1EQ15878 2313 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 LAMA5O15230 3695 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 SMG1Q96Q15 3661 aaKnown RBP11.23□□□□□ -0.61
CHMP6-203ENST00000572525 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 WDR27A2RRH5 827 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 INO80B-WBP1J3KQ70 363 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 LRG1P02750 347 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 THP07101 528 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 GDI1P31150 447 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 EPHA5P54756 1037 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 SF3A2Q15428 464 aaKnown RBP11.23□□□□□ -0.61
CHMP6-203ENST00000572525 NAB2Q15742 525 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 FAM78AQ5JUQ0 283 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 SLC8B1Q6J4K2 584 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 CEP57Q86XR8 500 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 TCEAL8Q8IYN2 117 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF461Q8TAF7 563 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 GATA6Q92908 595 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 PAAF1Q9BRP4 392 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 VPS45Q9NRW7 570 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 MAFFQ9ULX9 164 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 PLXND1Q9Y4D7 1925 aa11.23□□□□□ -0.61
CHMP6-203ENST00000572525 MYBPHLA2RUH7 354 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 PTGESO14684 152 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF263O14978 683 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 CHADO15335 359 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 ABLIM3O94929 683 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 ATF2P15336 505 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms