RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
TSR1-202ENST00000571806 OSBPL6Q9BZF3 934 aa17.07■□□□□ 0.32
TSR1-202ENST00000571806 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
TSR1-202ENST00000571806 DLGAP2Q9P1A6 1054 aa17.07■□□□□ 0.32
TSR1-202ENST00000571806 CDY1Q9Y6F8 540 aa17.07■□□□□ 0.32
TSR1-202ENST00000571806 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 EDN1P05305 212 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 MAGEA9P43362 315 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 GPC5P78333 572 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 PABPC1LQ4VXU2 614 aaKnown RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 XKR4Q5GH76 650 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 ALKAL1Q6UXT8 129 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 C4orf32Q8N8J7 132 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 ZNF461Q8TAF7 563 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 AVENQ9NQS1 362 aaPredicted RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 DDX19AQ9NUU7 478 aaKnown RBP17.06■□□□□ 0.32
TSR1-202ENST00000571806 GDE1Q9NZC3 331 aa17.06■□□□□ 0.32
TSR1-202ENST00000571806 VPS13AQ96RL7 3174 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 CCDC169A6NNP5 214 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 ADAM12O43184 909 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
TSR1-202ENST00000571806 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.32
TSR1-202ENST00000571806 ELF1P32519 619 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
TSR1-202ENST00000571806 NPTX2P47972 431 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 ECM1Q16610 540 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 SPECC1Q5M775 1068 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 NELL2Q99435 816 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
TSR1-202ENST00000571806 KIFC3Q9BVG8 833 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 CXCL16Q9H2A7 254 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 PTPRHQ9HD43 1115 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 DNMT3BQ9UBC3 853 aaKnown RBP17.05■□□□□ 0.32
TSR1-202ENST00000571806 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
TSR1-202ENST00000571806 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 H7C4K7 107 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 SYN3O14994 580 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ECI2O75521 394 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 MCF2P10911 925 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 PTPN2P17706 415 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
TSR1-202ENST00000571806 PRPHP41219 470 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ID4P47928 161 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 PEX3P56589 373 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 NTHL1P78549 312 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 PTGDRQ13258 359 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 SLC44A4Q53GD3 710 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ITFG1Q8TB96 612 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
TSR1-202ENST00000571806 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
TSR1-202ENST00000571806 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 KMT5AQ9NQR1 393 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ARHGAP28Q9P2N2 729 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 MAFFQ9ULX9 164 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 MRPS23Q9Y3D9 190 aaKnown RBP17.04■□□□□ 0.32
TSR1-202ENST00000571806 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
TSR1-202ENST00000571806 MYH15Q9Y2K3 1946 aa17.04■□□□□ 0.32
TSR1-202ENST00000571806 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 NCAM2O15394 837 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 MICAL2O94851 1124 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 ABLIM3O94929 683 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 LRG1P02750 347 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 SP9P0CG40 484 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 KCNE1P15382 129 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
TSR1-202ENST00000571806 MLF2Q15773 248 aaPredicted RBP17.03■□□□□ 0.32
TSR1-202ENST00000571806 ZNF528Q3MIS6 628 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 CD300LGQ6UXG3 332 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 DTHD1Q6ZMT9 781 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 NPAS3Q8IXF0 933 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 CDT1Q9H211 546 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 FBXO4Q9UKT5 387 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 KIF3AQ9Y496 699 aa17.03■□□□□ 0.32
TSR1-202ENST00000571806 PTPRZ1P23471 2315 aaPredicted RBP17.03■□□□□ 0.32
TSR1-202ENST00000571806 PODXLO00592 558 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 PRRG1O14668 218 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 ZNF197O14709 1029 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 HIP1RO75146 1068 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 RHOP08100 348 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 ATF2P15336 505 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 STRN3Q13033 797 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 TPGS2Q68CL5 300 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 TCEAL8Q8IYN2 117 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 FOXQ1Q9C009 403 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms