RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 PROZP22891 400 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 CDC25AP30304 524 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 AVPR2P30518 371 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 RPL9P32969 192 aaKnown RBP10.66□□□□□ -0.7
CIITA-207ENST00000571545 TXLNAP40222 546 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 CLCN6P51797 869 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 MAPK7Q13164 816 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 NAB2Q15742 525 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 IL17AQ16552 155 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 UPP1Q16831 310 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 XKR4Q5GH76 650 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 GLYCTKQ8IVS8 523 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 DAW1Q8N136 415 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 LNX1Q8TBB1 728 aaPredicted RBP10.66□□□□□ -0.7
CIITA-207ENST00000571545 BICD1Q96G01 975 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
CIITA-207ENST00000571545 PLEKHA5Q9HAU0 1116 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 PTPRHQ9HD43 1115 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 ANKFY1Q9P2R3 1169 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 FBXL21Q9UKT6 434 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 BACE2Q9Y5Z0 518 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 H7C4K7 107 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 PODXLO00592 558 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 CLDN3O15551 220 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 TBCAO75347 108 aaKnown RBP10.65□□□□□ -0.7
CIITA-207ENST00000571545 RFPL2O75678 378 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 FAM13AO94988 1023 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 EDN1P05305 212 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 ASGR2P07307 311 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 C8AP07357 584 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
CIITA-207ENST00000571545 MATR3P43243 847 aaKnown RBP eCLIP10.65□□□□□ -0.7
CIITA-207ENST00000571545 CLCN5P51795 746 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 CLCNKBP51801 687 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 SLC12A3P55017 1021 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 MCL1Q07820 350 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 RAB33AQ14088 237 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
CIITA-207ENST00000571545 KANK3Q6NY19 840 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 PRSS55Q6UWB4 352 aaPredicted RBP10.65□□□□□ -0.7
CIITA-207ENST00000571545 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 MTSS1LQ765P7 747 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 KCNK18Q7Z418 384 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 TMEM161BQ8NDZ6 487 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 B3GALT6Q96L58 329 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 CLSTN3Q9BQT9 956 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 PAAF1Q9BRP4 392 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
CIITA-207ENST00000571545 KCNK12Q9HB15 430 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 PARVGQ9HBI0 331 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 MAFFQ9ULX9 164 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 NUB1Q9Y5A7 615 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
CIITA-207ENST00000571545 TRIOO75962 3097 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 ARHGEF37A1IGU5 675 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 HNRNPDLO14979 420 aaKnown RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 KRT18P05783 430 aaKnown RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 CLTAP09496 248 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 SRFP11831 508 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 RPL17P18621 184 aaKnown RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 RFX1P22670 979 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 PAX3P23760 479 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 FSHRP23945 695 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 ELF1P32519 619 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 LIG4P49917 911 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 OSTNP61366 133 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 PPP2R3AQ06190 1150 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 CUL4AQ13619 759 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 GET4Q7L5D6 327 aaPredicted RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 TAS1R3Q7RTX0 852 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 GPBP1Q86WP2 473 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 APPL2Q8NEU8 664 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 SLC7A14Q8TBB6 771 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 ZNF707Q96C28 371 aaPredicted RBP10.64□□□□□ -0.71
CIITA-207ENST00000571545 PNMA5Q96PV4 448 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 RTP3Q9BQQ7 232 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 WNT16Q9UBV4 365 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 STK17AQ9UEE5 414 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 CCDC39Q9UFE4 941 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
CIITA-207ENST00000571545 K7ENM7 598 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 GALR2O43603 387 aaPredicted RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 SPATA31D3P0C874 917 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 LAMP2P13473 410 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 MCM4P33991 863 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 OR1D2P34982 312 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 MRE11P49959 708 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 ZNF131P52739 623 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 VCPP55072 806 aaKnown RBP10.63□□□□□ -0.71
CIITA-207ENST00000571545 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
CIITA-207ENST00000571545 SF3A1Q15459 793 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms