RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 RTN4RL1Q86UN2 441 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 TMEM199Q8N511 208 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 RPS6KC1Q96S38 1066 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 INTS2Q9H0H0 1204 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
HERPUD1-219ENST00000570273 RALGAPA2Q2PPJ7 1873 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 C9IYK1 514 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 PMM2O15305 246 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 PHACTR2O75167 634 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 ZACNQ401N2 412 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 GLRA4Q5JXX5 417 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 MFSD5Q6N075 450 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 NT5DC4Q86YG4 428 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 CACTINQ8WUQ7 758 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 FAM207AQ9NSI2 230 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 GIT1Q9Y2X7 761 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 DERAQ9Y315 318 aa16.66■□□□□ 0.26
HERPUD1-219ENST00000570273 SCN5AQ14524 2016 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 CLSTN1O94985 981 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 CSF2RAP15509 400 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 MLH1P40692 756 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 MLLT1Q03111 559 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 KCNMA1Q12791 1236 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 AGMOQ6ZNB7 445 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 C15orf39Q6ZRI6 1047 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 ZNF598Q86UK7 904 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 CXCL16Q9H2A7 254 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 UBN1Q9NPG3 1134 aa16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.26
HERPUD1-219ENST00000570273 ENPP3O14638 875 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 ACTN1P12814 892 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 KCNE1P15382 129 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 SLC9A1P19634 815 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 PON1P27169 355 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 FAM189BP81408 668 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 TRIM14Q14142 442 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 XKR4Q5GH76 650 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 EHBP1Q8NDI1 1231 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 BEST2Q8NFU1 509 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 ZFP42Q96MM3 310 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 ZMAT2Q96NC0 199 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 TSPAN18Q96SJ8 248 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 GAD1Q99259 594 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 RNF19AQ9NV58 838 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 COQ4Q9Y3A0 265 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
HERPUD1-219ENST00000570273 SMIM28A0A1B0GU29 152 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 XPOTO43592 962 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 EVI5O60447 810 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 VNN1O95497 513 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 EOMESO95936 686 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 PFKMP08237 780 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 TPM1P09493 284 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 APBA1Q02410 837 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 TRPC3Q13507 836 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 NCOA4Q13772 614 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 IKBKEQ14164 716 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 C1orf127Q8N9H9 656 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 NUP58Q9BVL2 599 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 PLCB1Q9NQ66 1216 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■■■■ 91.3
HERPUD1-219ENST00000570273 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 TMEM161AQ9NX61 479 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 IMPACTQ9P2X3 320 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 UBQLN1Q9UMX0 589 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 ANK1P16157 1881 aa16.63■□□□□ 0.25
HERPUD1-219ENST00000570273 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 PTGESO14684 152 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 EPHB6O15197 1021 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 KRT19P08727 400 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 SCNN1GP51170 649 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 LRMPQ12912 555 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.251e-7■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms