RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 PDGFBP01127 241 aaPredicted RBP24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 KCNE1P15382 129 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 PDCP20941 246 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 SCP2P22307 547 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 RAB33AQ14088 237 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 UVSSAQ2YD98 709 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 ZPBP2Q6X784 338 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 RTL10Q7L3V2 364 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 SNX27Q96L92 541 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 ODF2LQ9ULJ1 636 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 DUSP12Q9UNI6 340 aa24.66■■□□□ 1.54
RBFOX1-219ENST00000569895 CLDN3O15551 220 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 N4BP1O75113 896 aaKnown RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 XYLBO75191 536 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 MAPTP10636 758 aaKnown RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 HARSP12081 509 aaKnown RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 HOXA9P31269 272 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 RPL9P32969 192 aaKnown RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 OR1D2P34982 312 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 LONP1P36776 959 aaKnown RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 MRE11P49959 708 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 NOLC1Q14978 699 aaKnown RBP eCLIP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 RASSF8Q8NHQ8 419 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 GOLGA2P5Q9HBQ8 144 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 CNTN3Q9P232 1028 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 ANKFY1Q9P2R3 1169 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 MTRRQ9UBK8 725 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 FBXL21Q9UKT6 434 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 BACE2Q9Y5Z0 518 aa24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 ZFP37Q9Y6Q3 630 aaPredicted RBP24.65■■□□□ 1.54
RBFOX1-219ENST00000569895 ABLIM1O14639 778 aa24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 C8AP07357 584 aa24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 MATR3P43243 847 aaKnown RBP eCLIP24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 ASTLQ6HA08 431 aaPredicted RBP24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 ZBTB45Q96K62 511 aaPredicted RBP24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 MYADMQ96S97 322 aa24.64■■□□□ 1.54
RBFOX1-219ENST00000569895 ZNF318Q5VUA4 2279 aa24.64■■□□□ 1.53
RBFOX1-219ENST00000569895 MYO10Q9HD67 2058 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 PODXLO00592 558 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 LAMP2P13473 410 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 FSHRP23945 695 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 CLCN5P51795 746 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 TCF15Q12870 199 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 GET4Q7L5D6 327 aaPredicted RBP24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 GPBP1Q86WP2 473 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 BICD1Q96G01 975 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 ZMAT2Q96NC0 199 aaKnown RBP24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 NUB1Q9Y5A7 615 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 PLXNA3P51805 1871 aa24.63■■□□□ 1.53
RBFOX1-219ENST00000569895 DENND4AQ7Z401 1863 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 ADAM12O43184 909 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 TKTP29401 623 aaKnown RBP24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 BRCC3P46736 316 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 SOX4Q06945 474 aaPredicted RBP24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 MCL1Q07820 350 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 CUL4AQ13619 759 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 SF3A1Q15459 793 aaKnown RBP24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 KYAT1Q16773 422 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 ARSHQ5FYA8 562 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 AXDND1Q5T1B0 1012 aaPredicted RBP24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 CD300LGQ6UXG3 332 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 HAUS6Q7Z4H7 955 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 GRASPQ7Z6J2 395 aaPredicted RBP24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 PLEKHA5Q9HAU0 1116 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 POLIQ9UNA4 740 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 CDY1Q9Y6F8 540 aa24.62■■□□□ 1.53
RBFOX1-219ENST00000569895 NPHP3-ACAD11A0A0J9YXS1 232 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 VPS37CA5D8V6 355 aaPredicted RBP24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 H7C4K7 107 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 SYN3O14994 580 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 FAM13AO94988 1023 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 KRT18P05783 430 aaKnown RBP24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 POU2F2P09086 479 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 ABCD1P33897 745 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 NCKAP1LP55160 1127 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 CACNB1Q02641 598 aaPredicted RBP24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 DHX8Q14562 1220 aaKnown RBP24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 SLC44A3Q8N4M1 653 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 MYCT1Q8N699 235 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 C3orf58Q8NDZ4 430 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 SLC7A14Q8TBB6 771 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 KCNN1Q92952 543 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 WNT16Q9UBV4 365 aa24.61■■□□□ 1.53
RBFOX1-219ENST00000569895 I3L4J1 428 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 GALR2O43603 387 aaPredicted RBP24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 CLTAP09496 248 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 IGFBP6P24592 240 aaPredicted RBP24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 LIG4P49917 911 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 SLC10A6Q3KNW5 377 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 FLCNQ8NFG4 579 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 RSAD2Q8WXG1 361 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 REEP2Q9BRK0 252 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 PARVGQ9HBI0 331 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 C2orf16Q68DN1 1984 aa24.6■■□□□ 1.53
RBFOX1-219ENST00000569895 MTCL1Q9Y4B5 1905 aaKnown RBP24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 CCL16O15467 120 aa24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 ELF1P32519 619 aa24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 ZNF461Q8TAF7 563 aa24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 RAD54LQ92698 747 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms