RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 MBTD1Q05BQ5 628 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 DMP1Q13316 513 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 TMEM119Q4V9L6 283 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 COX20Q5RI15 118 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 SPOUT1Q5T280 376 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PDE12Q6L8Q7 609 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PPP2R3CQ969Q6 453 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 COL26A1Q96A83 441 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PNMA5Q96PV4 448 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 SAP130Q9H0E3 1048 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 STK39Q9UEW8 545 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 COG5Q9UP83 839 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PLAGL2Q9UPG8 496 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PCDHGC4Q9Y5F7 938 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 MRPL42Q9Y6G3 142 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 TTC3P53804 2025 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 CHD9Q3L8U1 2897 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 CNTNAP2Q9UHC6 1331 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 CCDC169A6NNP5 214 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 SPTLC2O15270 562 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 TSPAN1O60635 241 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 PPP6R2O75170 966 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 OFD1O75665 1012 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 YEATS4O95619 227 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ABL1P00519 1130 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ALDH2P05091 517 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 FGFR1P11362 822 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ITGA4P13612 1032 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 NCLP19338 710 aaKnown RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ABCD1P33897 745 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 PPM1AP35813 382 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 SLC12A3P55017 1021 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 CEBPZQ03701 1054 aaKnown RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 STK38Q15208 465 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 PAN2Q504Q3 1202 aaKnown RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 TIGD5Q53EQ6 642 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 NOMO2Q5JPE7 1267 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 PHLDB3Q6NSJ2 640 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 LRRC43Q8N309 656 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 LINC00301Q8NCQ3 95 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 URGCPQ8TCY9 931 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 USP28Q96RU2 1077 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 LARSQ9P2J5 1176 aaKnown RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 FBXO2Q9UK22 296 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 ATP6V1DQ9Y5K8 247 aa10.11□□□□□ -0.79
CAPN3-219ENST00000569136 MYH9P35579 1960 aaKnown RBP10.11□□□□□ -0.79
CAPN3-219ENST00000569136 DOCK5Q9H7D0 1870 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 N4BP3O15049 544 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 HIP1RO75146 1068 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 F13A1P00488 732 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PLS3P13797 630 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-219ENST00000569136 NPTX2P47972 431 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PEX3P56589 373 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PRPF4BQ13523 1007 aaKnown RBP10.1□□□□□ -0.79
CAPN3-219ENST00000569136 CCDC85BQ15834 202 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-219ENST00000569136 CLLU1OSQ5K130 101 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 UBXN11Q5T124 520 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 FAM173BQ6P4H8 233 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 CCDC73Q6ZRK6 1079 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 KCNK18Q7Z418 384 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 KCNG4Q8TDN1 519 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 ATXN2LQ8WWM7 1075 aaKnown RBP10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PPM1EQ8WY54 764 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 RAD54LQ92698 747 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 KCNN1Q92952 543 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 PLIN2Q99541 437 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 ADPGKQ9BRR6 497 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 RUSC1Q9BVN2 902 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-219ENST00000569136 LRRC27Q9C0I9 530 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 CWH43Q9H720 699 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 KMT5AQ9NQR1 393 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 RNF19AQ9NV58 838 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 SPG21Q9NZD8 308 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 ODF2LQ9ULJ1 636 aa10.1□□□□□ -0.79
CAPN3-219ENST00000569136 SCN5AQ14524 2016 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms