RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 KIAA1586Q9HCI6 787 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 CALCOCO1Q9P1Z2 691 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 OGDHLQ9ULD0 1010 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 GYPEP15421 78 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 IRAK1P51617 712 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 ZNF572Q7Z3I7 529 aaPredicted RBP7.07□□□□□ -1.28
UBR1-208ENST00000569066 OR5M3Q8NGP4 307 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 MAML1Q92585 1016 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 SLC7A6OSQ96CW6 309 aaPredicted RBP7.07□□□□□ -1.28
UBR1-208ENST00000569066 BTBD1Q9H0C5 482 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 ZNF287Q9HBT7 754 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 FAM53CQ9NYF3 392 aa7.07□□□□□ -1.28
UBR1-208ENST00000569066 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 GRM6O15303 877 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 SOX8P57073 446 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 CTXN1P60606 82 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 USP10Q14694 798 aaKnown RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 FAM214AQ32MH5 1076 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 HIBCHQ6NVY1 386 aaPredicted RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 USP30Q70CQ3 517 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 ACRBPQ8NEB7 543 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 MBD6Q96DN6 1003 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 ADAM29Q9UKF5 820 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR1-208ENST00000569066 TCRBV7S2A1N4TA0A589 114 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 GASTP01350 101 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 SESN2P58004 480 aaPredicted RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 PLXDC1Q8IUK5 500 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 REXO1L1PQ8IX06 675 aa7.06□□□□□ -1.28
UBR1-208ENST00000569066 BRIX1Q8TDN6 353 aaKnown RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 WDR12Q9GZL7 423 aaKnown RBP7.06□□□□□ -1.28
UBR1-208ENST00000569066 VSIG10L2P0DP72 767 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 TAL1P17542 331 aaPredicted RBP7.05□□□□□ -1.28
UBR1-208ENST00000569066 PPM1AP35813 382 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 ANKS6Q68DC2 871 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 ATG14Q6ZNE5 492 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 ADAMTS17Q8TE56 1095 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 CFHR4Q92496 578 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 FAM167AQ96KS9 214 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 CDC5LQ99459 802 aaKnown RBP7.05□□□□□ -1.28
UBR1-208ENST00000569066 C11orf54Q9H0W9 315 aaPredicted RBP7.05□□□□□ -1.28
UBR1-208ENST00000569066 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
UBR1-208ENST00000569066 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
UBR1-208ENST00000569066 SACM1LQ9NTJ5 587 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 COL20A1Q9P218 1284 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
UBR1-208ENST00000569066 MATN2O00339 956 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 SASH1O94885 1247 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 HALP42357 657 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 ANKRD42Q8N9B4 389 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 WDCPQ9H6R7 721 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 TRMT13Q9NUP7 481 aaKnown RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 MORC2Q9Y6X9 1032 aaPredicted RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 GLDCP23378 1020 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 PIK3CGP48736 1102 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 CCDC93Q567U6 631 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 GJC2Q5T442 439 aaPredicted RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 XYLT1Q86Y38 959 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 CARFQ8N187 725 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 CASKIN2Q8WXE0 1202 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 PIH1D1Q9NWS0 290 aaKnown RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
UBR1-208ENST00000569066 CNOT6Q9ULM6 557 aaKnown RBP7.04□□□□□ -1.28
UBR1-208ENST00000569066 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 JUNP05412 331 aaKnown RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 SARSP49591 514 aaKnown RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 MAPK10P53779 464 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 APBA1Q02410 837 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 DPP9Q86TI2 863 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 ZNF761Q86XN6 746 aaPredicted RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 Q8N3U1 123 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 OR10H5Q8NGA6 315 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 TRIM54Q9BYV2 358 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 SLC6A15Q9H2J7 730 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 PNPLA8Q9NP80 782 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 KCTD3Q9Y597 815 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 PCDHGB3Q9Y5G1 929 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 SH3D21A4FU49 640 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 MTSS1O43312 755 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 ARIH2O95376 493 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 EN2P19622 333 aaPredicted RBP7.03□□□□□ -1.28
UBR1-208ENST00000569066 ARFIP2P53365 341 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 NOMO3P69849 1222 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 MYRIPQ8NFW9 859 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 C18orf8Q96DM3 657 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 MRI1Q9BV20 369 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 ARFGAP3Q9NP61 516 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 IL23AQ9NPF7 189 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 NR2E1Q9Y466 385 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 PNPLA7Q6ZV29 1317 aa7.03□□□□□ -1.28
UBR1-208ENST00000569066 CXorf49A8MYA2 514 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms