RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 MRPS25P82663 173 aaKnown RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 PTK2Q05397 1052 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 KLHL30Q0D2K2 578 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 ELF2Q15723 593 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 MEA1Q16626 185 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 C1orf220Q5T0J3 134 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 CCDC62Q6P9F0 684 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 GBP6Q6ZN66 633 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 STXBP4Q6ZWJ1 553 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 ZC3H3Q8IXZ2 948 aaKnown RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 XXYLT1Q8NBI6 393 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 RNF149Q8NC42 400 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 MROH8Q9H579 483 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 SEPT11Q9NVA2 429 aaKnown RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 IGSF9BQ9UPX0 1349 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 K7ERI5 159 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 ZNF185O15231 689 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 KIF5CO60282 957 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 MZF1P28698 734 aaPredicted RBP9.25□□□□□ -0.93
TCF4-241ENST00000568740 CDR1P51861 262 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 NCKAP1LP55160 1127 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 NR6A1Q15406 480 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 TERF2Q15554 542 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 TAPT1Q6NXT6 567 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 ARHGEF19Q8IW93 802 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 ANKRD42Q8N9B4 389 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 HELQQ8TDG4 1101 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 SEMA4DQ92854 862 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 JAKMIP2Q96AA8 810 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 CAPZA3Q96KX2 299 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 IFT74Q96LB3 600 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 TRIM55Q9BYV6 548 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 SMARCAL1Q9NZC9 954 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 FLRT1Q9NZU1 646 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 IP6K2Q9UHH9 426 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 DNAJC12Q9UKB3 198 aa9.25□□□□□ -0.93
TCF4-241ENST00000568740 VGLL3A8MV65 326 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ZBTB42B2RXF5 422 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 SMAPO00193 183 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 B4GALT5O43286 388 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 NCK2O43639 380 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 STAM2O75886 525 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 MTA2O94776 668 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 FGFR4P22455 802 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 LIG4P49917 911 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 NLRP11P59045 1033 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 MYL7Q01449 175 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 PPP2R3AQ06190 1150 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 CAPSQ13938 189 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 DSC3Q14574 896 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 SPA17Q15506 151 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 TAF1CQ15572 869 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 EPC2Q52LR7 807 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 IL31Q6EBC2 164 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ANKS3Q6ZW76 656 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ZNF571Q7Z3V5 609 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 PALB2Q86YC2 1186 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 DEPTORQ8TB45 409 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 TMEM206Q9H813 350 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 PDE11AQ9HCR9 933 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 UBE2TQ9NPD8 197 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 CEP72Q9P209 647 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 FAM184BQ9ULE4 1060 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ABT1Q9ULW3 272 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 PACSIN2Q9UNF0 486 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 PCDHA13Q9Y5I0 950 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 CAPN6Q9Y6Q1 641 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 FOXN3O00409 490 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 IPO7O95373 1038 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 VTNP04004 478 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ATP1A1P05023 1023 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 KRT13P13646 458 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 SMPD1P17405 629 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 CYLC1P35663 651 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 TNFSF9P41273 254 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 KCNJ6P48051 423 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 RNASE9P60153 205 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 SQSTM1Q13501 440 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 TTLL4Q14679 1199 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 DRAP1Q14919 205 aaPredicted RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 PLCB4Q15147 1175 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ZNF792Q3KQV3 632 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 SPOPLQ6IQ16 392 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 TTC30AQ86WT1 665 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 KIFAP3Q92845 792 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 KIF12Q96FN5 646 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 ARHGAP39Q9C0H5 1083 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 TMEM117Q9H0C3 514 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 INTS2Q9H0H0 1204 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 PLEKHA4Q9H4M7 779 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 MINDY3Q9H8M7 445 aa9.24□□□□□ -0.93
TCF4-241ENST00000568740 NGRNQ9NPE2 291 aaKnown RBP9.24□□□□□ -0.93
TCF4-241ENST00000568740 KCND1Q9NSA2 647 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms