RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 FGFR3P22607 806 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 IGFBP6P24592 240 aaPredicted RBP32.11■■■□□ 2.73
RAB40C-211ENST00000568586 STK38Q15208 465 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 PDXDC1Q6P996 788 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 TMC5Q6UXY8 1006 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 PDZRN4Q6ZMN7 1036 aaPredicted RBP32.11■■■□□ 2.73
RAB40C-211ENST00000568586 SV2BQ7L1I2 683 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 MAP4K3Q8IVH8 894 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 DNAJC19Q96DA6 116 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 PLEKHA4Q9H4M7 779 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 MAN1C1Q9NR34 630 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 NR2E1Q9Y466 385 aa32.11■■■□□ 2.73
RAB40C-211ENST00000568586 MYMKA6NI61 221 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 SPTLC2O15270 562 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 YEATS4O95619 227 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 CLTAP09496 248 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 RPL9P32969 192 aaKnown RBP32.1■■■□□ 2.73
RAB40C-211ENST00000568586 KYAT1Q16773 422 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 ELMSAN1Q6PJG2 1045 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 DDX12PQ92771 950 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 GOLGA2P5Q9HBQ8 144 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 USTQ9Y2C2 406 aa32.1■■■□□ 2.73
RAB40C-211ENST00000568586 CITO14578 2027 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 A0A087X0B3 334 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 HNRNPDLO14979 420 aaKnown RBP32.09■■■□□ 2.73
RAB40C-211ENST00000568586 TGM5O43548 720 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 ADRB2P07550 413 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 HARSP12081 509 aaKnown RBP32.09■■■□□ 2.73
RAB40C-211ENST00000568586 LIG4P49917 911 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 PRSS55Q6UWB4 352 aaPredicted RBP32.09■■■□□ 2.73
RAB40C-211ENST00000568586 ZNF720Q7Z2F6 126 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 C3orf58Q8NDZ4 430 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 FEZF2Q8TBJ5 459 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 BICD1Q96G01 975 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 CLSTN3Q9BQT9 956 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 STRA6Q9BX79 667 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 TFIP11Q9UBB9 837 aaKnown RBP32.09■■■□□ 2.73
RAB40C-211ENST00000568586 SEL1LQ9UBV2 794 aa32.09■■■□□ 2.73
RAB40C-211ENST00000568586 A0A0B4J269 797 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 TTC26A0AVF1 554 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 PRR33A8MZF0 331 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 HSP90AA1P07900 732 aaKnown RBP32.08■■■□□ 2.73
RAB40C-211ENST00000568586 WEE2P0C1S8 567 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 NMT1P30419 496 aaKnown RBP32.08■■■□□ 2.73
RAB40C-211ENST00000568586 SLC39A4Q6P5W5 647 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 ZHX3Q9H4I2 956 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 PLXNA3P51805 1871 aa32.08■■■□□ 2.73
RAB40C-211ENST00000568586 TRAPPC3O43617 180 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 PPP1R37O75864 691 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 F13A1P00488 732 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 RPL17P18621 184 aaKnown RBP32.07■■■□□ 2.72
RAB40C-211ENST00000568586 SEZ6Q53EL9 994 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 DYMQ7RTS9 669 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 PALB2Q86YC2 1186 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 EDAQ92838 391 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 GTF3C5Q9Y5Q8 519 aaPredicted RBP32.07■■■□□ 2.72
RAB40C-211ENST00000568586 STYXL1Q9Y6J8 313 aa32.07■■■□□ 2.72
RAB40C-211ENST00000568586 MYH15Q9Y2K3 1946 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 FRMD3A2A2Y4 597 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 FAM86C2PA6NEL3 165 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 OGTO15294 1046 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 GAP43P17677 238 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 COL9A1P20849 921 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 ZBTB6Q15916 424 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 PSMD5Q16401 504 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 ATL3Q6DD88 541 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 CEP57Q86XR8 500 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 C18orf25Q96B23 403 aaPredicted RBP32.06■■■□□ 2.72
RAB40C-211ENST00000568586 HVCN1Q96D96 273 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 TSPAN18Q96SJ8 248 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 VWA8A3KMH1 1905 aa32.06■■■□□ 2.72
RAB40C-211ENST00000568586 PODXLO00592 558 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 CXCL8P10145 99 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 STAT6P42226 847 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 ZC2HC1CQ53FD0 456 aaPredicted RBP32.05■■■□□ 2.72
RAB40C-211ENST00000568586 SFR1Q86XK3 245 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 ZDHHC14Q8IZN3 488 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 ZDHHC7Q9NXF8 308 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 BACE2Q9Y5Z0 518 aa32.05■■■□□ 2.72
RAB40C-211ENST00000568586 MTCL1Q9Y4B5 1905 aaKnown RBP32.04■■■□□ 2.72
RAB40C-211ENST00000568586 CCDC195A0A1B0GUA6 201 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 C2CD4DB7Z1M9 353 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 KREMEN2Q8NCW0 462 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 ZNF707Q96C28 371 aaPredicted RBP32.04■■■□□ 2.72
RAB40C-211ENST00000568586 PANK2Q9BZ23 570 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 OLFML3Q9NRN5 406 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 MTRRQ9UBK8 725 aa32.04■■■□□ 2.72
RAB40C-211ENST00000568586 TECTAO75443 2155 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 CUTAO60888 179 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 SPATA31D3P0C874 917 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 TNFSF9P41273 254 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 MATR3P43243 847 aaKnown RBP eCLIP32.03■■■□□ 2.72
RAB40C-211ENST00000568586 ZXDAP98168 799 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 RAB33AQ14088 237 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 ENOX2Q16206 610 aaKnown RBP32.03■■■□□ 2.72
RAB40C-211ENST00000568586 E2F4Q16254 413 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 AXDND1Q5T1B0 1012 aaPredicted RBP32.03■■■□□ 2.72
RAB40C-211ENST00000568586 SPATA31D4Q6ZUB0 917 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 FBXW11Q9UKB1 542 aa32.03■■■□□ 2.72
RAB40C-211ENST00000568586 DENND4AQ7Z401 1863 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms