RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 LARP1BQ659C4 914 aaKnown RBP20.72■□□□□ 0.91
SPSB3-210ENST00000568416 RSAD2Q8WXG1 361 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 CDK5RAP3Q96JB5 506 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 ZBTB45Q96K62 511 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-210ENST00000568416 AK8Q96MA6 479 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 ACAP3Q96P50 834 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 TCHPQ9BT92 498 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 SLC38A7Q9NVC3 462 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 TRIOO75962 3097 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 SLC26A4O43511 780 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 NARSO43776 548 aaKnown RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 C8AP07357 584 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 MAPTP10636 758 aaKnown RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 TKTP29401 623 aaKnown RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 OR1D2P34982 312 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 BRCC3P46736 316 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 STRN3Q13033 797 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 ARSHQ5FYA8 562 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 PPM1LQ5SGD2 360 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 LIN9Q5TKA1 542 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 ASTLQ6HA08 431 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 RSPO2Q6UXX9 243 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 GET4Q7L5D6 327 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 NXPE3Q969Y0 559 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 DDX27Q96GQ7 796 aaKnown RBP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 MFSD1Q9H3U5 465 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.71■□□□□ 0.91
SPSB3-210ENST00000568416 CNTN3Q9P232 1028 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 BACE2Q9Y5Z0 518 aa20.71■□□□□ 0.91
SPSB3-210ENST00000568416 MUC6Q6W4X9 2439 aa20.7■□□□□ 0.91
SPSB3-210ENST00000568416 NPHP3-ACAD11A0A0J9YXS1 232 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 GALR2O43603 387 aaPredicted RBP20.7■□□□□ 0.9
SPSB3-210ENST00000568416 TRAPPC3O43617 180 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 TOM1L1O75674 476 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 LAMP2P13473 410 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 CLCN5P51795 746 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 SMTNP53814 917 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
SPSB3-210ENST00000568416 SLC44A3Q8N4M1 653 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 KCNN1Q92952 543 aa20.7■□□□□ 0.9
SPSB3-210ENST00000568416 I3L4J1 428 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 PODXLO00592 558 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 POU2F2P09086 479 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 HARSP12081 509 aaKnown RBP20.69■□□□□ 0.9
SPSB3-210ENST00000568416 NPR3P17342 541 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 FSHRP23945 695 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 NCKAP1LP55160 1127 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 CACNB1Q02641 598 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-210ENST00000568416 NOLC1Q14978 699 aaKnown RBP eCLIP20.69■□□□□ 0.9
SPSB3-210ENST00000568416 ZPBP2Q6X784 338 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 ANKS3Q6ZW76 656 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 GRASPQ7Z6J2 395 aaPredicted RBP20.69■□□□□ 0.9
SPSB3-210ENST00000568416 LRRC15Q8TF66 581 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 IRF2BPLQ9H1B7 796 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 LARSQ9P2J5 1176 aaKnown RBP20.69■□□□□ 0.9
SPSB3-210ENST00000568416 CDY1Q9Y6F8 540 aa20.69■□□□□ 0.9
SPSB3-210ENST00000568416 ANHXE9PGG2 379 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 NTHL1P78549 312 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 MCL1Q07820 350 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 CUL4AQ13619 759 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 UVSSAQ2YD98 709 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 SLC10A6Q3KNW5 377 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 AXDND1Q5T1B0 1012 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-210ENST00000568416 BRAPQ7Z569 592 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 SLC7A14Q8TBB6 771 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 C18orf25Q96B23 403 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-210ENST00000568416 CALML4Q96GE6 196 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 ANKFY1Q9P2R3 1169 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 ODF2LQ9ULJ1 636 aa20.68■□□□□ 0.9
SPSB3-210ENST00000568416 ZFP37Q9Y6Q3 630 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-210ENST00000568416 H0YCG3 227 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 CCL16O15467 120 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 BMP15O95972 392 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 AOC1P19801 751 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 RPL9P32969 192 aaKnown RBP20.67■□□□□ 0.9
SPSB3-210ENST00000568416 UBA7P41226 1012 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 GRIN1Q05586 938 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 HTR4Q13639 388 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 SEZ6Q53EL9 994 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 RTL10Q7L3V2 364 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 FLCNQ8NFG4 579 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 REEP2Q9BRK0 252 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 HAPLN2Q9GZV7 340 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 BLOC1S4Q9NUP1 217 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 FAM86C1Q9NVL1 165 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 WNT16Q9UBV4 365 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 FBXL21Q9UKT6 434 aa20.67■□□□□ 0.9
SPSB3-210ENST00000568416 VWA8A3KMH1 1905 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 MTCL1Q9Y4B5 1905 aaKnown RBP20.66■□□□□ 0.9
SPSB3-210ENST00000568416 H0Y858 1186 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 CLDN3O15551 220 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 TBC1D4O60343 1298 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 XYLBO75191 536 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 CFHP08603 1231 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 SRFP11831 508 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 LONP1P36776 959 aaKnown RBP20.66■□□□□ 0.9
SPSB3-210ENST00000568416 SF3A1Q15459 793 aaKnown RBP20.66■□□□□ 0.9
SPSB3-210ENST00000568416 VARS2Q5ST30 1063 aaKnown RBP20.66■□□□□ 0.9
SPSB3-210ENST00000568416 SLC8B1Q6J4K2 584 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 HAUS6Q7Z4H7 955 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms