RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 UBIAD1Q9Y5Z9 338 aa8.16□□□□□ -1.1
ATXN3-250ENST00000568290 MYH10P35580 1976 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PPIP5K2O43314 1243 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CALB1P05937 261 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 VIMP08670 466 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ABHD2P08910 425 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 MMP10P09238 476 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZBTB48P10074 688 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ALAS1P13196 640 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ATP2A2P16615 1042 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 COMTP21964 271 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ECHS1P30084 290 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PHBP35232 272 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CAP2P40123 477 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 SKIV2L2P42285 1042 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 SLC18A1P54219 525 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 MCL1Q07820 350 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PTK6Q13882 451 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 NEDD9Q14511 834 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZRSR2Q15696 482 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 UAP1Q16222 522 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CBWD6Q4V339 395 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZC2HC1CQ53FD0 456 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 XKR9Q5GH70 373 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CBWD3Q5JTY5 395 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CBWD5Q5RIA9 395 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PHLDB3Q6NSJ2 640 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 MIGA2Q7L4E1 593 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 SIAH1Q8IUQ4 282 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 RELL1Q8IUW5 271 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC13Q8IYE1 715 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 GPD1LQ8N335 351 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 RDH13Q8NBN7 331 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 FBF1Q8TES7 1133 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 RAPGEF5Q92565 580 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 BICD1Q96G01 975 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 FAXDC2Q96IV6 333 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 FIZ1Q96SL8 496 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF518BQ9C0D4 1074 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 DNAI2Q9GZS0 605 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 MIS12Q9H081 205 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 TDRD3Q9H7E2 651 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 AGO4Q9HCK5 861 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 OSGEPQ9NPF4 335 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 KCNH7Q9NS40 1196 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZDHHC18Q9NUE0 388 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 DDX56Q9NY93 547 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 KLHL14Q9P2G3 628 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF70Q9UC06 446 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 ASIC3Q9UHC3 531 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 DDX20Q9UHI6 824 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 TBX20Q9UMR3 447 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.1
ATXN3-250ENST00000568290 PCDHA10Q9Y5I2 948 aa8.15□□□□□ -1.1
ATXN3-250ENST00000568290 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
ATXN3-250ENST00000568290 NFASCO94856 1347 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 GSTTP1A0A1W2PQM5 241 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ZSCAN5CA6NGD5 496 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 RIPK2O43353 540 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 SORBS3O60504 671 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 LRRN2O75325 713 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF189O75820 626 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TJP3O95049 919 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TRIM49P0CI25 452 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TRIM49CP0CI26 452 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CYP11B1P15538 503 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TSHRP16473 764 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CNGA1P29973 690 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 POLR2BP30876 1174 aaKnown RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 MAP2K2P36507 400 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 GCLMP48507 274 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 PEX5P50542 639 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 LACTBP83111 547 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 XRCC4Q13426 336 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 RIPK1Q13546 671 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 SLC29A2Q14542 456 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CCNG2Q16589 344 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 FAM102BQ5T8I3 360 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 LRRC38Q5VT99 294 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ARHGEF16Q5VV41 709 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 DCAF15Q66K64 600 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 RCOR2Q8IZ40 523 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC63Q8NA47 563 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 CFAP61Q8NHU2 1237 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 PARD3BQ8TEW8 1205 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 POMGNT1Q8WZA1 660 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 RSRC1Q96IZ7 334 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms