RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 SMAD1Q15797 465 aaKnown RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 SWT1Q5T5J6 900 aaKnown RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 MIER3Q7Z3K6 550 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 DAW1Q8N136 415 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 OLIG1Q8TAK6 271 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 MICAL1Q8TDZ2 1067 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 TAS1R2Q8TE23 839 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 AGAP11Q8TF27 550 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 ATXN2LQ8WWM7 1075 aaKnown RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 POMGNT1Q8WZA1 660 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 BICD1Q96G01 975 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 ZNF668Q96K58 619 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 RMDN2Q96LZ7 410 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 ZNF317Q96PQ6 595 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 NAP1L3Q99457 506 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 SLCO1B3Q9NPD5 702 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 MTUS1Q9ULD2 1270 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 SLC45A1Q9Y2W3 748 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 PLIN4Q96Q06 1357 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 ADRB2P07550 413 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 KRT10P13645 584 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 COILP38432 576 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 ITGA8P53708 1063 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 DYNLT1P63172 113 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 CEP55Q53EZ4 464 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 RFX8Q6ZV50 586 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 SLC13A5Q86YT5 568 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 EPS8L1Q8TE68 723 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 DCPSQ96C86 337 aaKnown RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 CDCA5Q96FF9 252 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 FAM20AQ96MK3 541 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 KREMEN1Q96MU8 473 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 C11orf70Q9BRQ4 267 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 TMEM117Q9H0C3 514 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 ACTR5Q9H9F9 607 aaPredicted RBP6.91□□□□□ -1.3
GINS3-206ENST00000567143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.91□□□□□ -1.3
GINS3-206ENST00000567143 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
GINS3-206ENST00000567143 NFIBO00712 420 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 CFHP08603 1231 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 KRT16P08779 473 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 CETPP11597 493 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 ETS1P14921 441 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 MAPK4P31152 587 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 PTGIRP43119 386 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 AP3B2Q13367 1082 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 PPP2R5AQ15172 486 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 XKR9Q5GH70 373 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 CYFIP1Q7L576 1253 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 SAPCD2Q86UD0 394 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 TLCD1Q96CP7 247 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 BORCS6Q96GS4 357 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 TGS1Q96RS0 853 aaKnown RBP6.9□□□□□ -1.3
GINS3-206ENST00000567143 TELO2Q9Y4R8 837 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 PTPRFP10586 1907 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 ZNF236Q9UL36 1845 aa6.9□□□□□ -1.3
GINS3-206ENST00000567143 IGLV3-22A0A075B6J6 115 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 ANP32DO95626 131 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SLC10A3P09131 477 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 POTEJP0CG39 1038 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 RRM1P23921 792 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 EIF3BP55884 814 aaKnown RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 RASA3Q14644 834 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 CNGA2Q16280 664 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SUPT20HL1Q3ZLR7 823 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SAMD7Q7Z3H4 446 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 HAUS6Q7Z4H7 955 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 YTHDF3Q7Z739 585 aaKnown RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 ERICH1Q86X53 443 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.9□□□□□ -1.31
GINS3-206ENST00000567143 NACC1Q96RE7 527 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 FIZ1Q96SL8 496 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 CNOT10Q9H9A5 744 aaKnown RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SAE1Q9UBE0 346 aaPredicted RBP6.9□□□□□ -1.31
GINS3-206ENST00000567143 KAT6AQ92794 2004 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.31
GINS3-206ENST00000567143 RALAP11233 206 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 ITGB5P18084 799 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 KRT15P19012 456 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 CHRNA3P32297 505 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 MMP13P45452 471 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 TM4SF4P48230 202 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 RWDD2BP57060 319 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 FASTKD3Q14CZ7 662 aaKnown RBP6.89□□□□□ -1.31
GINS3-206ENST00000567143 UGCGQ16739 394 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 TATDN1Q6P1N9 297 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 TMEM179Q6ZVK1 233 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 ZNF365Q70YC5 407 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 VSIG1Q86XK7 387 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 FITM2Q8N6M3 262 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 GLIS1Q8NBF1 620 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 KLRG1Q96E93 195 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 CCDC17Q96LX7 622 aa6.89□□□□□ -1.31
GINS3-206ENST00000567143 FAM213AQ9BRX8 229 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms