RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PTPN5P54829 565 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 TCF15Q12870 199 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 STRN3Q13033 797 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 CUL4AQ13619 759 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 RAB33AQ14088 237 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 ZRSR1Q15695 479 aaKnown RBP15.61■□□□□ 0.09
COMMD4-216ENST00000567023 ARSHQ5FYA8 562 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 ZPBP2Q6X784 338 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 RTL10Q7L3V2 364 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
COMMD4-216ENST00000567023 CDK5RAP3Q96JB5 506 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 ZMAT2Q96NC0 199 aaKnown RBP15.61■□□□□ 0.09
COMMD4-216ENST00000567023 ACAP3Q96P50 834 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 TCHPQ9BT92 498 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 SLC38A7Q9NVC3 462 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 CNTN3Q9P232 1028 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 DUSP12Q9UNI6 340 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 VWA8A3KMH1 1905 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 HNRNPA1P09651 372 aaKnown RBP eCLIP15.6■□□□□ 0.09
COMMD4-216ENST00000567023 MAPTP10636 758 aaKnown RBP15.6■□□□□ 0.09
COMMD4-216ENST00000567023 SCP2P22307 547 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-216ENST00000567023 UVSSAQ2YD98 709 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 ALYREFQ86V81 257 aaKnown RBP15.6■□□□□ 0.09
COMMD4-216ENST00000567023 C3orf58Q8NDZ4 430 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 SNX27Q96L92 541 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 LARSQ9P2J5 1176 aaKnown RBP15.6■□□□□ 0.09
COMMD4-216ENST00000567023 MTRRQ9UBK8 725 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 ODF2LQ9ULJ1 636 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 BACE2Q9Y5Z0 518 aa15.6■□□□□ 0.09
COMMD4-216ENST00000567023 H0YCG3 227 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 MEFVO15553 781 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-216ENST00000567023 ADAM12O43184 909 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 POU2F2P09086 479 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 RPL9P32969 192 aaKnown RBP15.59■□□□□ 0.09
COMMD4-216ENST00000567023 LONP1P36776 959 aaKnown RBP15.59■□□□□ 0.09
COMMD4-216ENST00000567023 UBA7P41226 1012 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 CLCN5P51795 746 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 NCKAP1LP55160 1127 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 OSTNP61366 133 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 MCL1Q07820 350 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 RAD51AP2Q09MP3 1159 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 ANKS3Q6ZW76 656 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 ZBTB45Q96K62 511 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-216ENST00000567023 MYADMQ96S97 322 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 PLIN2Q99541 437 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 IRF2BPLQ9H1B7 796 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 GOLGA2P5Q9HBQ8 144 aa15.59■□□□□ 0.09
COMMD4-216ENST00000567023 ZFP37Q9Y6Q3 630 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-216ENST00000567023 DOCK8Q8NF50 2099 aa15.58■□□□□ 0.09
COMMD4-216ENST00000567023 CLDN3O15551 220 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 C8AP07357 584 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 LAMP2P13473 410 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 GBP2P32456 591 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-216ENST00000567023 OR1D2P34982 312 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 MRE11P49959 708 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 ZNF131P52739 623 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 NOLC1Q14978 699 aaKnown RBP eCLIP15.58■□□□□ 0.08
COMMD4-216ENST00000567023 SLC10A6Q3KNW5 377 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 LIN9Q5TKA1 542 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 CALML4Q96GE6 196 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 BLOC1S4Q9NUP1 217 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 MYH11P35749 1972 aa15.58■□□□□ 0.08
COMMD4-216ENST00000567023 VPS13AQ96RL7 3174 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 CITO14578 2027 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 NPHP3-ACAD11A0A0J9YXS1 232 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 PODXLO00592 558 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 SYN3O14994 580 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 TBC1D4O60343 1298 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 PDCP20941 246 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 GRIN1Q05586 938 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 MRPL58Q14197 206 aaKnown RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 SF3A1Q15459 793 aaKnown RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 PPM1LQ5SGD2 360 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 AXDND1Q5T1B0 1012 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 SLC8B1Q6J4K2 584 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 RSPO2Q6UXX9 243 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 HAUS6Q7Z4H7 955 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-216ENST00000567023 SLC44A3Q8N4M1 653 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 TMEM105Q8N8V8 129 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 LRRC15Q8TF66 581 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 WNT16Q9UBV4 365 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 CDY1Q9Y6F8 540 aa15.57■□□□□ 0.08
COMMD4-216ENST00000567023 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
COMMD4-216ENST00000567023 PIGRP01833 764 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 NPR3P17342 541 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 FSHRP23945 695 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 BRCC3P46736 316 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 ZNF461Q8TAF7 563 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 SLC7A14Q8TBB6 771 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 RSAD2Q8WXG1 361 aa15.56■□□□□ 0.08
COMMD4-216ENST00000567023 C18orf25Q96B23 403 aaPredicted RBP15.56■□□□□ 0.08
COMMD4-216ENST00000567023 REEP2Q9BRK0 252 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms