RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 FNIP2Q9P278 1114 aa13.55□□□□□ -0.24
KLHDC4-216ENST00000566561 CACNA1AO00555 2505 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 PROB1E7EW31 1015 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CLDN3O15551 220 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 TGM5O43548 720 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 PROZP22891 400 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CLCNKBP51801 687 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 NCKAP1LP55160 1127 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 PTPAQ15257 358 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 C15orf39Q6ZRI6 1047 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CCDC149Q6ZUS6 474 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CCSER1Q9C0I3 900 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 ZSCAN16Q9H4T2 348 aaPredicted RBP13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 SORCS3Q9UPU3 1222 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
KLHDC4-216ENST00000566561 DENND4AQ7Z401 1863 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 K7ENM7 598 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 ABLIM1O14639 778 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 STX6O43752 255 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 TRAK2O60296 914 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 BRD1O95696 1058 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 DDIT3P35638 169 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 TXLNAP40222 546 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 LIG4P49917 911 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PSMD5Q16401 504 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 SEZ6Q53EL9 994 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PDXDC1Q6P996 788 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 SRPRBQ9Y5M8 271 aaKnown RBP13.53□□□□□ -0.24
KLHDC4-216ENST00000566561 PRR23AA6NEV1 266 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 RFPL2O75678 378 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 PDGFBP01127 241 aaPredicted RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 MCL1Q07820 350 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 UPP1Q16831 310 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 SMG7Q92540 1137 aaKnown RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 ZMAT2Q96NC0 199 aaKnown RBP13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 CLIC6Q96NY7 704 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
KLHDC4-216ENST00000566561 DMDP11532 3685 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 PODXLO00592 558 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 C1RP00736 705 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 CLTAP09496 248 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 KCNE1P15382 129 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 SCP2P22307 547 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 NBL1P41271 181 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 BRCC3P46736 316 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 ZNF131P52739 623 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 LILRA6Q6PI73 481 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 OTOP3Q7RTS5 596 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 ZDHHC14Q8IZN3 488 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 SNX21Q969T3 373 aa13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
KLHDC4-216ENST00000566561 USP28Q96RU2 1077 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms