RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 REXO1Q8N1G1 1221 aaKnown RBP9.35□□□□□ -0.91
CDH13-207ENST00000565636 SLC39A11Q8N1S5 342 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 METTL13Q8N6R0 699 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 CCDC148Q8NFR7 591 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 RPGRIP1Q96KN7 1286 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 TCF25Q9BQ70 676 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 RNF26Q9BY78 433 aaPredicted RBP9.35□□□□□ -0.91
CDH13-207ENST00000565636 AGXT2Q9BYV1 514 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 GCOM2Q9BZD3 368 aaPredicted RBP9.35□□□□□ -0.91
CDH13-207ENST00000565636 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
CDH13-207ENST00000565636 FAM13BQ9NYF5 915 aa9.35□□□□□ -0.91
CDH13-207ENST00000565636 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
CDH13-207ENST00000565636 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 PER2O15055 1255 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 RXRAP19793 462 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 CYP3A7P24462 503 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 NBL1P41271 181 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 GPC3P51654 580 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 KIZQ2M2Z5 673 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 Q4G0T1 1027 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 XKR3Q5GH77 459 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 C15orf39Q6ZRI6 1047 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 CNNM3Q8NE01 707 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 HDAC7Q8WUI4 952 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 TMEM169Q96HH4 297 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 OSMRQ99650 979 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 UBN1Q9NPG3 1134 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 ANO2Q9NQ90 1003 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 ENTPD7Q9NQZ7 604 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 DISC1Q9NRI5 854 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
CDH13-207ENST00000565636 USP34Q70CQ2 3546 aa9.34□□□□□ -0.91
CDH13-207ENST00000565636 GOLGA8AA7E2F4 631 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 GOLGA8BA8MQT2 603 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 ASAP2O43150 1006 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 GAS2O43903 313 aaKnown RBP9.33□□□□□ -0.92
CDH13-207ENST00000565636 CXCL14O95715 111 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CTSAP10619 480 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 SFPQP23246 707 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH13-207ENST00000565636 AKAP17AQ02040 695 aaKnown RBP9.33□□□□□ -0.92
CDH13-207ENST00000565636 LRP8Q14114 963 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CACTIN-AS1Q8N1I8 211 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CMASQ8NFW8 434 aaPredicted RBP9.33□□□□□ -0.92
CDH13-207ENST00000565636 VN1R2Q8NFZ6 395 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 SLC5A5Q92911 643 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 LENG9Q96B70 501 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 ACSF2Q96CM8 615 aaPredicted RBP9.33□□□□□ -0.92
CDH13-207ENST00000565636 SNX27Q96L92 541 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 RTP3Q9BQQ7 232 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 RNF19AQ9NV58 838 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 IGSF9Q9P2J2 1179 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 GABBR1Q9UBS5 961 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 BRPF3Q9ULD4 1205 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 AKT3Q9Y243 479 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 SAMM50Q9Y512 469 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 HCFC2Q9Y5Z7 792 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CFAP54Q96N23 3096 aa9.33□□□□□ -0.92
CDH13-207ENST00000565636 CNTNAP2Q9UHC6 1331 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 C2orf16Q68DN1 1984 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 DOCK8Q8NF50 2099 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 KLF18A0A0U1RQI7 1052 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 hCG_1642624A0A1W2PR95 340 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 HIDE1A8MVS5 230 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 CLASP2O75122 1294 aaKnown RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 MAFO75444 373 aaPredicted RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 VTNP04004 478 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 ALDH2P05091 517 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 IFNAR1P17181 557 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 BRD2P25440 801 aaKnown RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 PSMA5P28066 241 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 SOX18P35713 384 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 GATMP50440 423 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH13-207ENST00000565636 BCAR1P56945 870 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 POU5F1BQ06416 359 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 NONOQ15233 471 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH13-207ENST00000565636 FOXD4L6Q3SYB3 417 aaPredicted RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 JAKMIP3Q5VZ66 844 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 GLB1LQ6UWU2 654 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 B3GNT9Q6UX72 402 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 FOXD4L3Q6VB84 417 aaPredicted RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 OTOP3Q7RTS5 596 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 ERMP1Q7Z2K6 904 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 MRPL10Q7Z7H8 261 aaKnown RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 TMEM87AQ8NBN3 555 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 KREMEN2Q8NCW0 462 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 SLC22A17Q8WUG5 538 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 ATOH1Q92858 354 aaPredicted RBP9.32□□□□□ -0.92
CDH13-207ENST00000565636 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
CDH13-207ENST00000565636 ZBTB10Q96DT7 871 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms