RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 SYT2Q8N9I0 419 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-209ENST00000565511 TMEM161BQ8NDZ6 487 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 CCDC94Q9BW85 323 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-209ENST00000565511 MTRRQ9UBK8 725 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 USP34Q70CQ2 3546 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 MYH15Q9Y2K3 1946 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 C8AP07357 584 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 PLA2G4BP0C869 781 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 ELAVL2Q12926 359 aaKnown RBP26.03■■□□□ 1.76
RAB40C-209ENST00000565511 ARSHQ5FYA8 562 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 ASTLQ6HA08 431 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-209ENST00000565511 DCLRE1AQ6PJP8 1040 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 MPZL3Q6UWV2 235 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 GRASPQ7Z6J2 395 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-209ENST00000565511 STAMQ92783 540 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 C18orf25Q96B23 403 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-209ENST00000565511 PRRX2Q99811 253 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 HAPLN2Q9GZV7 340 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 IGSF9Q9P2J2 1179 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 COL4A3Q01955 1670 aa26.03■■□□□ 1.76
RAB40C-209ENST00000565511 MYO15AQ9UKN7 3530 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 H0Y858 1186 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 CCL16O15467 120 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 GALR2O43603 387 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-209ENST00000565511 PI15O43692 258 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 MAPTP10636 758 aaKnown RBP26.02■■□□□ 1.76
RAB40C-209ENST00000565511 MCF2P10911 925 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 PLS3P13797 630 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 OR1D2P34982 312 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 FLCNQ8NFG4 579 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 SPIRE2Q8WWL2 714 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 NTPCRQ9BSD7 190 aaKnown RBP26.02■■□□□ 1.76
RAB40C-209ENST00000565511 SMC3Q9UQE7 1217 aa26.02■■□□□ 1.76
RAB40C-209ENST00000565511 RAB33AQ14088 237 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 SIX5Q8N196 739 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 SLC44A3Q8N4M1 653 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 SLC7A14Q8TBB6 771 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 UROC1Q96N76 676 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 C17orf75Q9HAS0 396 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 HCFC1R1Q9NWW0 138 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 CNTN3Q9P232 1028 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 ANKFY1Q9P2R3 1169 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 RBM19Q9Y4C8 960 aaKnown RBP26.01■■□□□ 1.75
RAB40C-209ENST00000565511 CDY1Q9Y6F8 540 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 DMDP11532 3685 aa26.01■■□□□ 1.75
RAB40C-209ENST00000565511 KRBA1A5PL33 1030 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 PODXLO00592 558 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 CFHP08603 1231 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 LAMP2P13473 410 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 KCNE1P15382 129 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 YARSP54577 528 aaKnown RBP26■■□□□ 1.75
RAB40C-209ENST00000565511 HTR4Q13639 388 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 LIN9Q5TKA1 542 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 ARL6IP4Q66PJ3 421 aaKnown RBP26■■□□□ 1.75
RAB40C-209ENST00000565511 APBB1IPQ7Z5R6 666 aaPredicted RBP26■■□□□ 1.75
RAB40C-209ENST00000565511 TIPINQ9BVW5 301 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 MFSD1Q9H3U5 465 aa26■■□□□ 1.75
RAB40C-209ENST00000565511 ZFHX2Q9C0A1 2572 aaPredicted RBP26■■□□□ 1.75
RAB40C-209ENST00000565511 ANHXE9PGG2 379 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 FSHRP23945 695 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 SLC10A6Q3KNW5 377 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 PPM1LQ5SGD2 360 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 AXDND1Q5T1B0 1012 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-209ENST00000565511 ITFG1Q8TB96 612 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 ACAP3Q96P50 834 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 TCHPQ9BT92 498 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 RPP25Q9BUL9 199 aaKnown RBP25.99■■□□□ 1.75
RAB40C-209ENST00000565511 TOPORSQ9NS56 1045 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-209ENST00000565511 BLOC1S4Q9NUP1 217 aa25.99■■□□□ 1.75
RAB40C-209ENST00000565511 HNRNPA1P09651 372 aaKnown RBP eCLIP25.98■■□□□ 1.75
RAB40C-209ENST00000565511 NOLC1Q14978 699 aaKnown RBP eCLIP25.98■■□□□ 1.75
RAB40C-209ENST00000565511 LARP1BQ659C4 914 aaKnown RBP25.98■■□□□ 1.75
RAB40C-209ENST00000565511 TUBGCP4Q9UGJ1 667 aa25.98■■□□□ 1.75
RAB40C-209ENST00000565511 FBXL21Q9UKT6 434 aa25.98■■□□□ 1.75
RAB40C-209ENST00000565511 BACE2Q9Y5Z0 518 aa25.98■■□□□ 1.75
RAB40C-209ENST00000565511 NUMBLQ9Y6R0 609 aa25.98■■□□□ 1.75
RAB40C-209ENST00000565511 TOM1L1O75674 476 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 HOXA9P31269 272 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 CLCN5P51795 746 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 NCKAP1LP55160 1127 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 VARS2Q5ST30 1063 aaKnown RBP25.97■■□□□ 1.75
RAB40C-209ENST00000565511 PDXDC1Q6P996 788 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 POTEHQ6S545 545 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 ATOH1Q92858 354 aaPredicted RBP25.97■■□□□ 1.75
RAB40C-209ENST00000565511 CDK5RAP3Q96JB5 506 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 REEP2Q9BRK0 252 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.97■■□□□ 1.755e-8■■■■□ 19.6
RAB40C-209ENST00000565511 CA14Q9ULX7 337 aa25.97■■□□□ 1.75
RAB40C-209ENST00000565511 CXCL8P10145 99 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 AOC1P19801 751 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 MCM2P49736 904 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 ROR1Q01973 937 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 SPAG1Q07617 926 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 MCL1Q07820 350 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 ZBTB41Q5SVQ8 909 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 PARM1Q6UWI2 310 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 GPBP1Q86WP2 473 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 FGF14Q92915 247 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 UPF2Q9HAU5 1272 aaKnown RBP25.96■■□□□ 1.75
RAB40C-209ENST00000565511 DNMT3BQ9UBC3 853 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms