RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PDCP20941 246 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 LONP1P36776 959 aaKnown RBP21.76■■□□□ 1.07
CLN6-206ENST00000565471 SOX4Q06945 474 aaPredicted RBP21.76■■□□□ 1.07
CLN6-206ENST00000565471 TDGQ13569 410 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 ARSHQ5FYA8 562 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 SMOC2Q9H3U7 446 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 GOLGA2P5Q9HBQ8 144 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 CNTN3Q9P232 1028 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 EPS15L1Q9UBC2 864 aa21.76■■□□□ 1.07
CLN6-206ENST00000565471 CITO14578 2027 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 ZDBF2Q9HCK1 2354 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 HNRNPA1P09651 372 aaKnown RBP eCLIP21.75■■□□□ 1.07
CLN6-206ENST00000565471 SCP2P22307 547 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 AVPR2P30518 371 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 VCPP55072 806 aaKnown RBP21.75■■□□□ 1.07
CLN6-206ENST00000565471 NCKAP1LP55160 1127 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 RAB33AQ14088 237 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
CLN6-206ENST00000565471 SF3A1Q15459 793 aaKnown RBP21.75■■□□□ 1.07
CLN6-206ENST00000565471 IER5LQ5T953 404 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 LIN9Q5TKA1 542 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 C3orf58Q8NDZ4 430 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 PRSS33Q8NF86 280 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 ZBTB45Q96K62 511 aaPredicted RBP21.75■■□□□ 1.07
CLN6-206ENST00000565471 ZMAT2Q96NC0 199 aaKnown RBP21.75■■□□□ 1.07
CLN6-206ENST00000565471 KCNK12Q9HB15 430 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 MTRRQ9UBK8 725 aa21.75■■□□□ 1.07
CLN6-206ENST00000565471 NPHP3-ACAD11A0A0J9YXS1 232 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 PDGFBP01127 241 aaPredicted RBP21.74■■□□□ 1.07
CLN6-206ENST00000565471 IGFBP6P24592 240 aaPredicted RBP21.74■■□□□ 1.07
CLN6-206ENST00000565471 HOXA9P31269 272 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 GBP2P32456 591 aaPredicted RBP21.74■■□□□ 1.07
CLN6-206ENST00000565471 NUBP1P53384 320 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 REEP2Q9BRK0 252 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 BLOC1S4Q9NUP1 217 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.072e-9■■■■■ 36.3
CLN6-206ENST00000565471 ANKFY1Q9P2R3 1169 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 DUSP12Q9UNI6 340 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 BACE2Q9Y5Z0 518 aa21.74■■□□□ 1.07
CLN6-206ENST00000565471 VPS37CA5D8V6 355 aaPredicted RBP21.73■■□□□ 1.07
CLN6-206ENST00000565471 PODXLO00592 558 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 ADAM12O43184 909 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 C8AP07357 584 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 HARSP12081 509 aaKnown RBP21.73■■□□□ 1.07
CLN6-206ENST00000565471 TKTP29401 623 aaKnown RBP21.73■■□□□ 1.07
CLN6-206ENST00000565471 RPL9P32969 192 aaKnown RBP21.73■■□□□ 1.07
CLN6-206ENST00000565471 ZNF131P52739 623 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 PTPN5P54829 565 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 CACNB1Q02641 598 aaPredicted RBP21.73■■□□□ 1.07
CLN6-206ENST00000565471 GRIN1Q05586 938 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 MCL1Q07820 350 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 ANKS3Q6ZW76 656 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 HAUS6Q7Z4H7 955 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 GPBP1Q86WP2 473 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 LRRC15Q8TF66 581 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 NXPE3Q969Y0 559 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 MYADMQ96S97 322 aa21.73■■□□□ 1.07
CLN6-206ENST00000565471 DOCK8Q8NF50 2099 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 CLDN3O15551 220 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 MEFVO15553 781 aaPredicted RBP21.72■■□□□ 1.07
CLN6-206ENST00000565471 POU2F2P09086 479 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 PLCG1P19174 1290 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 OR1D2P34982 312 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 BRCC3P46736 316 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 UVSSAQ2YD98 709 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 SLC10A6Q3KNW5 377 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 PPM1LQ5SGD2 360 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 RTL10Q7L3V2 364 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 RASSF8Q8NHQ8 419 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 RAD54LQ92698 747 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 CCSER1Q9C0I3 900 aa21.72■■□□□ 1.07
CLN6-206ENST00000565471 PDCD11Q14690 1871 aaKnown RBP21.71■■□□□ 1.07
CLN6-206ENST00000565471 SYN3O14994 580 aa21.71■■□□□ 1.07
CLN6-206ENST00000565471 KARSQ15046 597 aaKnown RBP21.71■■□□□ 1.07
CLN6-206ENST00000565471 PLEKHA5Q9HAU0 1116 aa21.71■■□□□ 1.07
CLN6-206ENST00000565471 PARVGQ9HBI0 331 aa21.71■■□□□ 1.07
CLN6-206ENST00000565471 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.71■■□□□ 1.07
CLN6-206ENST00000565471 CDY1Q9Y6F8 540 aa21.71■■□□□ 1.07
CLN6-206ENST00000565471 ZFP37Q9Y6Q3 630 aaPredicted RBP21.71■■□□□ 1.07
CLN6-206ENST00000565471 I3L4J1 428 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 XYLBO75191 536 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 FAM13AO94988 1023 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 PIGRP01833 764 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 CLTAP09496 248 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 LAMP2P13473 410 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 TCF15Q12870 199 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 DHX8Q14562 1220 aaKnown RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 MCM6Q14566 821 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 PTPAQ15257 358 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 AXDND1Q5T1B0 1012 aaPredicted RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 RSPO2Q6UXX9 243 aaPredicted RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 GET4Q7L5D6 327 aaPredicted RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 MYCT1Q8N699 235 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 SLC7A14Q8TBB6 771 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 LARP4BQ92615 738 aaKnown RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 C18orf25Q96B23 403 aaPredicted RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 BICD1Q96G01 975 aa21.7■■□□□ 1.06
CLN6-206ENST00000565471 INTS4Q96HW7 963 aaKnown RBP21.7■■□□□ 1.06
CLN6-206ENST00000565471 K7ENM7 598 aa21.69■■□□□ 1.06
CLN6-206ENST00000565471 SYT1P21579 422 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms