RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 SNX27Q96L92 541 aa16.52■□□□□ 0.24
CX3CL1-203ENST00000564948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.52■□□□□ 0.241e-7■■■■■ 35
CX3CL1-203ENST00000564948 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
CX3CL1-203ENST00000564948 MTRRQ9UBK8 725 aa16.52■□□□□ 0.24
CX3CL1-203ENST00000564948 N4BP1O75113 896 aaKnown RBP16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 TOM1L1O75674 476 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 C8AP07357 584 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 KCNE1P15382 129 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 HOXA9P31269 272 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 UBA7P41226 1012 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 TCF15Q12870 199 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 RAB33AQ14088 237 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 NOLC1Q14978 699 aaKnown RBP eCLIP16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 ALKAL1Q6UXT8 129 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 ZPBP2Q6X784 338 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 ANKS3Q6ZW76 656 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 TMEM161BQ8NDZ6 487 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 MYADMQ96S97 322 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 CNTN3Q9P232 1028 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 ANKFY1Q9P2R3 1169 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 FBXL21Q9UKT6 434 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 MUC6Q6W4X9 2439 aa16.51■□□□□ 0.23
CX3CL1-203ENST00000564948 KMT2EQ8IZD2 1858 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 C2orf16Q68DN1 1984 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 PODXLO00592 558 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 ABLIM1O14639 778 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 XYLBO75191 536 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 FSHRP23945 695 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 TKTP29401 623 aaKnown RBP16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 BICD1Q96G01 975 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 BACE2Q9Y5Z0 518 aa16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 ZFP37Q9Y6Q3 630 aaPredicted RBP16.5■□□□□ 0.23
CX3CL1-203ENST00000564948 TRIOO75962 3097 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 CLDN3O15551 220 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 ADAM12O43184 909 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 POU2F2P09086 479 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 LAMP2P13473 410 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 SCP2P22307 547 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 RPL9P32969 192 aaKnown RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 OR1D2P34982 312 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 LONP1P36776 959 aaKnown RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 BRCC3P46736 316 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 CLCN5P51795 746 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 SOX4Q06945 474 aaPredicted RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 UVSSAQ2YD98 709 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 GRASPQ7Z6J2 395 aaPredicted RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 GPBP1Q86WP2 473 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 C3orf58Q8NDZ4 430 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 SLC7A14Q8TBB6 771 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 ZBTB45Q96K62 511 aaPredicted RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 ZMAT2Q96NC0 199 aaKnown RBP16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 POLIQ9UNA4 740 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 NUB1Q9Y5A7 615 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 CDY1Q9Y6F8 540 aa16.49■□□□□ 0.23
CX3CL1-203ENST00000564948 I3L4J1 428 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 SYN3O14994 580 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 CCL16O15467 120 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 FAM13AO94988 1023 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 PDCP20941 246 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 NCKAP1LP55160 1127 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 MCL1Q07820 350 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 CD300LGQ6UXG3 332 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 TMEM105Q8N8V8 129 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 FLCNQ8NFG4 579 aa16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.48■□□□□ 0.23
CX3CL1-203ENST00000564948 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 SRFP11831 508 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 IGFBP6P24592 240 aaPredicted RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 LIG4P49917 911 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 CUL4AQ13619 759 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 DHX8Q14562 1220 aaKnown RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 KYAT1Q16773 422 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 VARS2Q5ST30 1063 aaKnown RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 HAUS6Q7Z4H7 955 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 SIX5Q8N196 739 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 SLC44A3Q8N4M1 653 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 RSAD2Q8WXG1 361 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 ATOH1Q92858 354 aaPredicted RBP16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 KCNN1Q92952 543 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 REEP2Q9BRK0 252 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 PARVGQ9HBI0 331 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 WNT16Q9UBV4 365 aa16.47■□□□□ 0.23
CX3CL1-203ENST00000564948 ANHXE9PGG2 379 aa16.46■□□□□ 0.23
CX3CL1-203ENST00000564948 H7C4K7 107 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms