RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 MAST3O60307 1309 aa5.92□□□□□ -1.46
CHD9-212ENST00000564641 PNPLA7Q6ZV29 1317 aa5.92□□□□□ -1.46
CHD9-212ENST00000564641 A0A1B0GTW7 788 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 ALAS1P13196 640 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 GCSHP23434 173 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 MRPS21P82921 87 aaKnown RBP5.91□□□□□ -1.46
CHD9-212ENST00000564641 TMPRSS15P98073 1019 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 TOR2AQ5JU69 321 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 SDE2Q6IQ49 451 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 FOXR2Q6PJQ5 311 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 CAGE1Q8TC20 777 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 ASB10Q8WXI3 467 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 ALOXE3Q9BYJ1 711 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 GALNT9Q9HCQ5 603 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 C14orf119Q9NWQ9 140 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 KCNE5Q9UJ90 142 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 MAP3K2Q9Y2U5 619 aa5.91□□□□□ -1.46
CHD9-212ENST00000564641 EYA4O95677 639 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 GSPT1P15170 499 aaKnown RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 CXCR5P32302 372 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 PPP3CAQ08209 521 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 FOXI1Q12951 378 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 NOMO1Q15155 1222 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 ATP2B3Q16720 1220 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 RNF219Q5W0B1 726 aaPredicted RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 KRT26Q7Z3Y9 468 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 SPATS2Q86XZ4 545 aaKnown RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.9□□□□□ -1.46
CHD9-212ENST00000564641 WDR66Q8TBY9 1149 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 SSH1Q8WYL5 1049 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 BBC3Q96PG8 261 aaPredicted RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 TBCCD1Q9NVR7 557 aa5.9□□□□□ -1.46
CHD9-212ENST00000564641 TESQ9UGI8 421 aaKnown RBP5.9□□□□□ -1.46
CHD9-212ENST00000564641 MYADML2A6NDP7 307 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 GPR39O43194 453 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 VIL1P09327 827 aaKnown RBP5.89□□□□□ -1.47
CHD9-212ENST00000564641 GPR3P46089 330 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 MTNR1BP49286 362 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
CHD9-212ENST00000564641 OCA2Q04671 838 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 B3GNTL1Q67FW5 361 aaPredicted RBP5.89□□□□□ -1.47
CHD9-212ENST00000564641 ZNF529Q6P280 563 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 SEM1Q6ZVN7 128 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 CMIPQ8IY22 773 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 AJAP1Q9UKB5 411 aaPredicted RBP5.89□□□□□ -1.47
CHD9-212ENST00000564641 PRKAB1Q9Y478 270 aa5.89□□□□□ -1.47
CHD9-212ENST00000564641 K7ESF4 209 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 MASP2O00187 686 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 GPANK1O95872 356 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 ELANEP08246 267 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 CKBP12277 381 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 MPLP40238 635 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 ALDH1A3P47895 512 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 CLK3P49761 638 aaKnown RBP5.88□□□□□ -1.47
CHD9-212ENST00000564641 CXADRP78310 365 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 RD3Q7Z3Z2 195 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 COLGALT2Q8IYK4 626 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 SIMC1Q8NDZ2 872 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 MED15Q96RN5 788 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 CCM2LQ9NUG4 571 aaPredicted RBP5.88□□□□□ -1.47
CHD9-212ENST00000564641 USP35Q9P2H5 1018 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 DMTF1Q9Y222 760 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
CHD9-212ENST00000564641 GPR32O75388 356 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 FGFR4P22455 802 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 CNGA1P29973 690 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 SCAPQ12770 1279 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 GPR149Q86SP6 731 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 SLC44A3Q8N4M1 653 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD9-212ENST00000564641 FBXO18Q8NFZ0 1043 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 NLGN4YQ8NFZ3 816 aaPredicted RBP5.87□□□□□ -1.47
CHD9-212ENST00000564641 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 STON2Q8WXE9 905 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 RNF31Q96EP0 1072 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 DMRT3Q9NQL9 472 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 MYO15BQ96JP2 1530 aa5.87□□□□□ -1.47
CHD9-212ENST00000564641 PRKD3O94806 890 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 C21orf58P58505 322 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 CREMQ03060 361 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 GIMAP6Q6P9H5 292 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 Q6ZNX1 250 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 FITM2Q8N6M3 262 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 Q96MF0 132 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 PNKPQ96T60 521 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 C7orf25Q9BPX7 421 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 ADARB2Q9NS39 739 aaKnown RBP5.86□□□□□ -1.47
CHD9-212ENST00000564641 SLC23A1Q9UHI7 598 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 TLK1Q9UKI8 766 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 SIK3Q9Y2K2 1263 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 MTO1Q9Y2Z2 717 aaKnown RBP5.86□□□□□ -1.47
CHD9-212ENST00000564641 PCDHGA2Q9Y5H1 932 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 GPR45Q9Y5Y3 372 aa5.86□□□□□ -1.47
CHD9-212ENST00000564641 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
CHD9-212ENST00000564641 ERN1O75460 977 aaKnown RBP5.85□□□□□ -1.47
CHD9-212ENST00000564641 HSD11B2P80365 405 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms