RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ATP7BP35670 1465 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 GOLGA6CA6NDK9 693 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 FAM90A27PA6NNH2 459 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ACOT7O00154 380 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 MPHOSPH10O00566 681 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 SCDO00767 359 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 KCNK3O14649 394 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 EIF3HO15372 352 aaKnown RBP eCLIP6.17□□□□□ -1.42
CHD9-210ENST00000564582 FBXO21O94952 628 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 HOXB7P09629 217 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 JMJD7P0C870 316 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 UBTFL1P0CB47 393 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 GOLGA6DP0CG33 693 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ME1P48163 572 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 HERVK_113P62684 666 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 DLX2Q07687 328 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 DBPQ10586 325 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 RESTQ13127 1097 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ZNF460Q14592 562 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 SNCBQ16143 134 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ME3Q16798 604 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 GLE1Q53GS7 698 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 PLEKHG4Q58EX7 1191 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ARMCX5Q6P1M9 558 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 EMBQ6PCB8 327 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 SYNE3Q6ZMZ3 975 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 DTX3Q8N9I9 347 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 EIF1ADQ8N9N8 165 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 MARCH10Q8NA82 808 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 CHST14Q8NCH0 376 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 CFAP61Q8NHU2 1237 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 IGDCC4Q8TDY8 1250 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 COG1Q8WTW3 980 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 CCDC47Q96A33 483 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 DTNBP1Q96EV8 351 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 NAPGQ99747 312 aaPredicted RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 SYT3Q9BQG1 590 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 PYM1Q9BRP8 204 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 ZCCHC17Q9NP64 241 aaKnown RBP6.17□□□□□ -1.42
CHD9-210ENST00000564582 ECHDC1Q9NTX5 307 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 GOLGA6AQ9NYA3 693 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 RNF14Q9UBS8 474 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 MCM8Q9UJA3 840 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 HECW2Q9P2P5 1572 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 ADGRF5Q8IZF2 1346 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 A0A1W2PP64 1363 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 KDRP35968 1356 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 CACNA1FO60840 1977 aa6.17□□□□□ -1.42
CHD9-210ENST00000564582 IFT172Q9UG01 1749 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ADGRB3O60242 1522 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ARHGEF40Q8TER5 1519 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 VWA3AA6NCI4 1184 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ZNF839A8K0R7 811 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 AKR1B15C9JRZ8 316 aaPredicted RBP6.16□□□□□ -1.42
CHD9-210ENST00000564582 EXOC5O00471 708 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 TRIM13O60858 407 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 PPP6R2O75170 966 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 CHGBP05060 677 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 GYS2P54840 703 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 SLURP1P55000 103 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 IRF9Q00978 393 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 PFKPQ01813 784 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 SPAG1Q07617 926 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 SKIDA1Q1XH10 827 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 CEP85LQ5SZL2 805 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 CREB3L3Q68CJ9 461 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 PKN3Q6P5Z2 889 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
CHD9-210ENST00000564582 RASGRP2Q7LDG7 609 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 OTOP1Q7RTM1 612 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 CROCCP2Q86T23 111 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 IQCA1Q86XH1 822 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 PROSER1Q86XN7 944 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 NOSTRINQ8IVI9 506 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ADGRG2Q8IZP9 1017 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 AHI1Q8N157 1196 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 FSIP1Q8NA03 581 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 C8orf58Q8NAV2 365 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 TP53I13Q8NBR0 393 aaPredicted RBP6.16□□□□□ -1.42
CHD9-210ENST00000564582 BCAS4Q8TDM0 211 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 SAAL1Q96ER3 474 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 MFSD3Q96ES6 412 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ZNF274Q96GC6 653 aaPredicted RBP6.16□□□□□ -1.42
CHD9-210ENST00000564582 PGBD1Q96JS3 809 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 MEIS3Q99687 375 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 HAUS4Q9H6D7 363 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 KLC4Q9NSK0 619 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 ARHGAP20Q9P2F6 1191 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 TUBE1Q9UJT0 475 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 EXOC6BQ9Y2D4 811 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 CEMIPQ8WUJ3 1361 aa6.16□□□□□ -1.42
CHD9-210ENST00000564582 FAM237AA0A1B0GTK4 181 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 GOLGA6BA6NDN3 693 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 PFKFB2O60825 505 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms