RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PCDHA13Q9Y5I0 950 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 MYBBP1AQ9BQG0 1328 aaKnown RBP6.48□□□□□ -1.37
UBR1-205ENST00000564540 WASHC2CQ9Y4E1 1318 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 PRSS23O95084 383 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 DDCP20711 480 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 WASP42768 502 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 INHBCP55103 352 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 ATP8B2P98198 1209 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 PTPN21Q16825 1174 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 TSHZ3Q63HK5 1081 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 MRGPRGQ86SM5 289 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
UBR1-205ENST00000564540 OR56A1Q8NGH5 318 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 SMAD5Q99717 465 aaKnown RBP6.47□□□□□ -1.37
UBR1-205ENST00000564540 MANSC1Q9H8J5 431 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 TNKSO95271 1327 aa6.47□□□□□ -1.37
UBR1-205ENST00000564540 A0A087X1B8 175 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 TCRBV7S2A1N4TA0A589 114 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 UNC119BA6NIH7 251 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 TMEM200CA6NKL6 621 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 POMCP01189 267 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 SPATA31D3P0C874 917 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 EDNRBP24530 442 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 FSTL1Q12841 308 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 ODF1Q14990 250 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 PTPAQ15257 358 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 LAIR1Q6GTX8 287 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 PCSK4Q6UW60 755 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 SPATA31D4Q6ZUB0 917 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 SEM1Q6ZVN7 128 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 RHOT2Q8IXI1 618 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 CEP89Q96ST8 783 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 PRRX2Q99811 253 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 ADAM2Q99965 735 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 ZSWIM1Q9BR11 485 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 ASPSCR1Q9BZE9 553 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 KLHL11Q9NVR0 708 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 SAP30BPQ9UHR5 308 aaKnown RBP6.46□□□□□ -1.38
UBR1-205ENST00000564540 ATP11BQ9Y2G3 1177 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 IPPQ9Y573 584 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 MRFAP1Q9Y605 127 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 FPGT-TNNI3KV9GXZ4 949 aa6.46□□□□□ -1.38
UBR1-205ENST00000564540 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
UBR1-205ENST00000564540 CCDC78A2IDD5 438 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 MARCH11A6NNE9 402 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 FOXN1O15353 648 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 TEX33O43247 280 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 PPFIA4O75335 1185 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 ELANEP08246 267 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 KIF23Q02241 960 aaPredicted RBP6.45□□□□□ -1.38
UBR1-205ENST00000564540 TARDBPQ13148 414 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBR1-205ENST00000564540 IL10RAQ13651 578 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 C3orf36Q3SXR2 165 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 MIGA2Q7L4E1 593 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 PNMA8AQ86V59 439 aaPredicted RBP6.45□□□□□ -1.38
UBR1-205ENST00000564540 DCBLD1Q8N8Z6 715 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 GPATCH3Q96I76 525 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 SERPINB13Q9UIV8 391 aa6.45□□□□□ -1.38
UBR1-205ENST00000564540 CCDC154A6NI56 674 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 KIAA0391O15091 583 aaKnown RBP6.44□□□□□ -1.38
UBR1-205ENST00000564540 HTRA2O43464 458 aaPredicted RBP6.44□□□□□ -1.38
UBR1-205ENST00000564540 RAMP2O60895 175 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 CFIP05156 583 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 DDX6P26196 483 aaKnown RBP eCLIP6.44□□□□□ -1.38
UBR1-205ENST00000564540 BMPR1AP36894 532 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 SLC16A1P53985 500 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 RESTQ13127 1097 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 PTPROQ16827 1216 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 MAPKAPK5Q8IW41 473 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 TMX3Q96JJ7 454 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 WDR11Q9BZH6 1224 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 SERHL2Q9H4I8 314 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 TDP1Q9NUW8 608 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 DMRT1Q9Y5R6 373 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
UBR1-205ENST00000564540 A0A1B0GTW7 788 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 GRID2IPA4D2P6 1211 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 TMEM191CA6NGB0 347 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 ZEB1P37275 1124 aaPredicted RBP6.43□□□□□ -1.38
UBR1-205ENST00000564540 KRT85P78386 507 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 OCA2Q04671 838 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 TP53BP2Q13625 1128 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 RSPH3Q86UC2 560 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 ARHGEF19Q8IW93 802 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 KAT5Q92993 513 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 HDAC10Q969S8 669 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 COA7Q96BR5 231 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 AGAP2Q99490 1192 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 GSTO2Q9H4Y5 243 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
UBR1-205ENST00000564540 CDHR4A6H8M9 788 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 SPDEFO95238 335 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 HLA-DOAP06340 250 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 GCSHP23434 173 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms